RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CDH8P55286 799 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 LLGL1Q15334 1064 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 KIZQ2M2Z5 673 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 SGO2Q562F6 1265 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 DNAJC24Q6P3W2 148 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 LRIG3Q6UXM1 1119 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 KATNAL2Q8IYT4 538 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 ADAMTS10Q9H324 1103 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 SMYD3Q9H7B4 428 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 LCMT1Q9UIC8 334 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 SNX24Q9Y343 169 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 O00370 1275 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 IGF2BP3O00425 579 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMPD3-211ENST00000568373 MED7O43513 233 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 POLR2BP30876 1174 aaKnown RBP19.23■□□□□ 0.67
SMPD3-211ENST00000568373 GBP1P32455 592 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 ERICH1Q86X53 443 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 LHX5Q9H2C1 402 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 CYP3A43Q9HB55 503 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 ITGA11Q9UKX5 1188 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 USTQ9Y2C2 406 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 NRCAMQ92823 1304 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 ECM2O94769 699 aaPredicted RBP19.22■□□□□ 0.67
SMPD3-211ENST00000568373 SMIM10L2AP0DMW4 78 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 SMIM10L2BP0DMW5 78 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 P4HA1P13674 534 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 FGFR4P22455 802 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 GRM5P41594 1212 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 TAP1Q03518 808 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 DHX9Q08211 1270 aaKnown RBP19.22■□□□□ 0.67
SMPD3-211ENST00000568373 DCAF4L1Q3SXM0 396 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 DENND1BQ6P3S1 775 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 NT5DC4Q86YG4 428 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 SLCO2A1Q92959 643 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 HPDLQ96IR7 371 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 MCEEQ96PE7 176 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 GRHL1Q9NZI5 618 aa19.22■□□□□ 0.67
SMPD3-211ENST00000568373 ERICH4A6NGS2 130 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 CILPO75339 1184 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 ITGBL1O95965 494 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-211ENST00000568373 RPL21P46778 160 aaKnown RBP19.21■□□□□ 0.67
SMPD3-211ENST00000568373 KCNJ1P48048 391 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 CDC42EP1Q00587 391 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 PPP1R15BQ5SWA1 713 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 ZDHHC24Q6UX98 284 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 CCDC50Q8IVM0 306 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 C3orf20Q8ND61 904 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 C1orf54Q8WWF1 131 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 KAT2BQ92831 832 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 HERPUD2Q9BSE4 406 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 TXLNGYQ9BZA5 131 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 GCOM2Q9BZD3 368 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-211ENST00000568373 FAM49AQ9H0Q0 323 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-211ENST00000568373 FLRT1Q9NZU1 646 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 STRIP2Q9ULQ0 834 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 PTPN22Q9Y2R2 807 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 PASKQ96RG2 1323 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 H0YGN5 161 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 PPFIA2O75334 1257 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 ECEL1O95672 775 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 CAPN2P17655 700 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 SSR1P43307 286 aaKnown RBP19.21■□□□□ 0.67
SMPD3-211ENST00000568373 PLTPP55058 493 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 ZNF252P-AS1Q0IIN9 211 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 TMEM62Q0P6H9 643 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 OLFML2BQ68BL8 750 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 DCUN1D2Q6PH85 259 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 TLK2Q86UE8 772 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 RASAL3Q86YV0 1011 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 SLC4A11Q8NBS3 891 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 EXD1Q8NHP7 514 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 UBLCP1Q8WVY7 318 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-211ENST00000568373 DPP3Q9NY33 737 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 PARP2Q9UGN5 583 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 HMGXB4Q9UGU5 601 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 AGAP1Q9UPQ3 857 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 GINS2Q9Y248 185 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 NFS1Q9Y697 457 aa19.21■□□□□ 0.67
SMPD3-211ENST00000568373 MBLAC1A4D2B0 266 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 KIF3CO14782 793 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 GPR32O75388 356 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 ZNF865P0CJ78 1059 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 RALAP11233 206 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 HOXA11P31270 313 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 RBP5P82980 135 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 PTPN11Q06124 597 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 KLF1Q13351 362 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 TAF1CQ15572 869 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 PTPN20Q4JDL3 420 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 SPDYCQ5MJ68 293 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 CYP4A22Q5TCH4 519 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 FBXO25Q8TCJ0 367 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 TWNKQ96RR1 684 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 ELOVL4Q9GZR5 314 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 SMIM35A0A1B0GVV1 85 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 MANSC4A6NHS7 340 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 STAU1O95793 577 aaKnown RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 ZNF157P51786 506 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-211ENST00000568373 CEP85LQ5SZL2 805 aa19.2■□□□□ 0.66
SMPD3-211ENST00000568373 APBB1IPQ7Z5R6 666 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms