RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NDUFAF2Q8N183 169 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 FAM71DQ8N9W8 422 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 OXNAD1Q96HP4 312 aaPredicted RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 GRIP2Q9C0E4 1043 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 PAIP2BQ9ULR5 123 aaKnown RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 MYH7BA7E2Y1 1941 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 TMEM150BA6NC51 233 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 LRRIQ4A6NIV6 560 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 PIK3CDO00329 1044 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 ZMPSTE24O75844 475 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 WEE2P0C1S8 567 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 GNA15P30679 374 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 KRT81Q14533 505 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 ACAD10Q6JQN1 1059 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 SYDE1Q6ZW31 735 aaPredicted RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 DCLK2Q8N568 766 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 CCDC33Q8N5R6 958 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 GSTCDQ8NEC7 633 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 E2F7Q96AV8 911 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 MCEEQ96PE7 176 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 TUBGCP5Q96RT8 1024 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 IWS1Q96ST2 819 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 NMUR2Q9GZQ4 415 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 CST8O60676 142 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 CHRNB2P17787 502 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 GM2AP17900 193 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 MSX2P35548 267 aaPredicted RBP11.44□□□□□ -0.58
PALB2-206ENST00000568219 RTP1P59025 263 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 OSTNP61366 133 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 LBRQ14739 615 aaKnown RBP11.44□□□□□ -0.58
PALB2-206ENST00000568219 ABCB5Q2M3G0 1257 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 SYDE2Q5VT97 1194 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 C1orf228Q6PIY5 440 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 MYLK4Q86YV6 388 aaPredicted RBP11.44□□□□□ -0.58
PALB2-206ENST00000568219 EPS8L1Q8TE68 723 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 PHF12Q96QT6 1004 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 MECRQ9BV79 373 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 VPS11Q9H270 941 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 TAS2R1Q9NYW7 299 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 SLC9A2Q9UBY0 812 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 APRTP07741 180 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 ANPEPP15144 967 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 ACOT2P49753 483 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 PRELPP51888 382 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 STX3Q13277 289 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 MAPK6Q16659 721 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 TMEM259Q4ZIN3 620 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 COBLL1Q53SF7 1204 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 GRAMD4Q6IC98 578 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 RINLQ6ZS11 566 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 TRIM42Q8IWZ5 723 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 TRIM11Q96F44 468 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 CEP170P1Q96L14 293 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 SIKE1Q9BRV8 207 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 EPB41L4BQ9H329 900 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 ETNK2Q9NVF9 386 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 M0R2N6 131 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 GALNTL6Q49A17 601 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 TMPRSS6Q8IU80 811 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 PPP2R3CQ969Q6 453 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 UTP4Q969X6 686 aaKnown RBP11.44□□□□□ -0.58
PALB2-206ENST00000568219 VTI1AQ96AJ9 217 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 PRPF18Q99633 342 aaKnown RBP11.44□□□□□ -0.58
PALB2-206ENST00000568219 UBE2OQ9C0C9 1292 aaKnown RBP11.44□□□□□ -0.58
PALB2-206ENST00000568219 CAAP1Q9H8G2 361 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 SIX2Q9NPC8 291 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 SEPT10Q9P0V9 454 aa11.44□□□□□ -0.58
PALB2-206ENST00000568219 ARHGAP10A1A4S6 786 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 A6NHS1 94 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 GH2P01242 217 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 GALK1P51570 392 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 AP3B2Q13367 1082 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 ART3Q13508 389 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 DNAL1Q4LDG9 190 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 LIN52Q52LA3 116 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 PPP6R3Q5H9R7 873 aaPredicted RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 SPOPLQ6IQ16 392 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 ETNPPLQ8TBG4 499 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 GDPD5Q8WTR4 605 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 TRAPPC9Q96Q05 1148 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 WDR11Q9BZH6 1224 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 RAB6BQ9NRW1 208 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 ZNF212Q9UDV6 495 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 INPP5FQ9Y2H2 1132 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 GTPBP10A4D1E9 387 aaKnown RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 ATP6V1G1O75348 118 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 PROCP04070 461 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 EIF2AK2P19525 551 aaKnown RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 ITPK1Q13572 414 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 CNPY1Q3B7I2 92 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 MARK2Q7KZI7 788 aaKnown RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 DEPDC1BQ8WUY9 529 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 LRRC19Q9H756 370 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 DTNAQ9Y4J8 743 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 TBC1D12O60347 775 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 ENO3P13929 434 aaPredicted RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 NELFEP18615 380 aaKnown RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 SOX11P35716 441 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms