RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PTDSS1P48651 473 aaKnown RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 SBK1Q52WX2 424 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 PAFAH2Q99487 392 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 CD209Q9NNX6 404 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 GABBR1Q9UBS5 961 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 FCHO1O14526 889 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 ENTPD5O75356 428 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 SERPINB8P50452 374 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 PKN1Q16512 942 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 KCTD19Q17RG1 926 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 MTHFD1LQ6UB35 978 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 CENPTQ96BT3 561 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 ARMCX1Q9P291 453 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 FAM205AQ6ZU69 1335 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 PALM3A6NDB9 673 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 SERPINB2P05120 415 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 RPA1P27694 616 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 ACOT2P49753 483 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 ZNF543Q08ER8 600 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 CCDC15Q0P6D6 951 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 C16orf72Q14CZ0 275 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 ADRM1Q16186 407 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 TMPRSS6Q8IU80 811 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 BBS5Q8N3I7 341 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 KLHL25Q9H0H3 589 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 MYO3AQ8NEV4 1616 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 XPOTO43592 962 aaKnown RBP12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 TNFRSF8P28908 595 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 VCPP55072 806 aaKnown RBP12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 PIGHQ14442 188 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 PLD3Q8IV08 490 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 IQCKQ8N0W5 287 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 CNDP1Q96KN2 507 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 FSD1LQ9BXM9 530 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 TASP1Q9H6P5 420 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 MTMR4Q9NYA4 1195 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 USP31Q70CQ4 1352 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 UNC5CO95185 931 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 TRADDQ15628 312 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 CNGA2Q16280 664 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 ACAD10Q6JQN1 1059 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 SLC5A5Q92911 643 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 TRAPPC9Q96Q05 1148 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 IL1RL2Q9HB29 575 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 SEPT3Q9UH03 358 aa12.96□□□□□ -0.33
CSPG4P13-202ENST00000567704 FLT1P17948 1338 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 AKAP3O75969 853 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 ADARP55265 1226 aaKnown RBP12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 PSMC5P62195 406 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 TNFAIP1Q13829 316 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 MAPK6Q16659 721 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 FAXCQ5TGI0 409 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 NT5DC3Q86UY8 548 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 FBXL16Q8N461 479 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 SLC20A1Q8WUM9 679 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 CACYBPQ9HB71 228 aaKnown RBP12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 ARHGAP23Q9P227 1491 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 KIAA1210Q9ULL0 1709 aa12.96□□□□□ -0.34
CSPG4P13-202ENST00000567704 SERPINB5P36952 375 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 KRT76Q01546 638 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 PCNX4Q63HM2 1172 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 SWSAP1Q6NVH7 229 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 ANGPTL8Q6UXH0 198 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 SH3RF1Q7Z6J0 888 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 FEZF2Q8TBJ5 459 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZNF668Q96K58 619 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 TBC1D10AQ9BXI6 508 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 AGPAT3Q9NRZ7 376 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 CTNNAL1Q9UBT7 734 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 USP21Q9UK80 565 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 REXO2Q9Y3B8 237 aaKnown RBP12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 AP4S1Q9Y587 144 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 BAZ2BQ9UIF8 2168 aaKnown RBP12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 M0QZ92 97 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 PDGFRAP16234 1089 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 GPC3P51654 580 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 CCNHP51946 323 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 PLEKHA7Q6IQ23 1121 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 SETD3Q86TU7 594 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 SCFD1Q8WVM8 642 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 CASP10Q92851 521 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 SH3GL2Q99962 352 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 POLR3FQ9H1D9 316 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 PAK5Q9P286 719 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 SNX13Q9Y5W8 968 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 TECPR2O15040 1411 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 FAM237AA0A1B0GTK4 181 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 RNF225M0QZC1 329 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 CES2O00748 559 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 CCDC85BQ15834 202 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZNF568Q3ZCX4 644 aa12.95□□□□□ -0.34
CSPG4P13-202ENST00000567704 LPCAT2Q7L5N7 544 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms