RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 NME7Q9Y5B8 376 aa13.34□□□□□ -0.27
RNF40-211ENST00000567365 SNX9Q9Y5X1 595 aa13.34□□□□□ -0.27
RNF40-211ENST00000567365 TRIOO75962 3097 aa13.34□□□□□ -0.27
RNF40-211ENST00000567365 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
RNF40-211ENST00000567365 RFPL2O75678 378 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 ZMYND10O75800 440 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 HLA-DRAP01903 254 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 FAM163BP0C2L3 166 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 SPATA31D3P0C874 917 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 SRGAP2BP0DMP2 458 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 KRT13P13646 458 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 IL9P15248 144 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 ATF2P15336 505 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 HOXA9P31269 272 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 GCLMP48507 274 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 GPR17Q13304 367 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 NCOA4Q13772 614 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 CLUL1Q15846 466 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 CT47A1Q5JQC4 288 aaPredicted RBP13.33□□□□□ -0.28
RNF40-211ENST00000567365 CCDC183Q5T5S1 534 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
RNF40-211ENST00000567365 SPATA31D4Q6ZUB0 917 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 GPR149Q86SP6 731 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 TCEAL8Q8IYN2 117 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 TAS1R2Q8TE23 839 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 TMEM209Q96SK2 561 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 ZCWPW1Q9H0M4 648 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 CRISPLD1Q9H336 500 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 EPHX3Q9H6B9 360 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 TMEM8AQ9HCN3 771 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 ZDHHC7Q9NXF8 308 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 ARMCX3Q9UH62 379 aaPredicted RBP13.33□□□□□ -0.28
RNF40-211ENST00000567365 AFF4Q9UHB7 1163 aaKnown RBP13.33□□□□□ -0.28
RNF40-211ENST00000567365 MAFFQ9ULX9 164 aa13.33□□□□□ -0.28
RNF40-211ENST00000567365 USP15Q9Y4E8 981 aaPredicted RBP13.33□□□□□ -0.28
RNF40-211ENST00000567365 PMM2O15305 246 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 HUS1O60921 280 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 LRRN2O75325 713 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 TACC1O75410 805 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 SEC24AO95486 1093 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 OR4Q2P0C623 313 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 WARSP23381 471 aaKnown RBP13.32□□□□□ -0.28
RNF40-211ENST00000567365 ERCC5P28715 1186 aaPredicted RBP13.32□□□□□ -0.28
RNF40-211ENST00000567365 ITIH3Q06033 890 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 BIRC3Q13489 604 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 CBWD6Q4V339 395 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 CBWD3Q5JTY5 395 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 CBWD5Q5RIA9 395 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 EP400NLQ6ZTU2 488 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 LRRTM3Q86VH5 581 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 TRIM59Q8IWR1 403 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 TAF4BQ92750 862 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 SEMA4DQ92854 862 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.28
RNF40-211ENST00000567365 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
RNF40-211ENST00000567365 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
RNF40-211ENST00000567365 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 APOBEC3GQ9HC16 384 aaKnown RBP13.32□□□□□ -0.28
RNF40-211ENST00000567365 METTL14Q9HCE5 456 aaKnown RBP13.32□□□□□ -0.28
RNF40-211ENST00000567365 DPP7Q9UHL4 492 aa13.32□□□□□ -0.28
RNF40-211ENST00000567365 HCRTO43612 131 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 C8AP07357 584 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 HNRNPA1P09651 372 aaKnown RBP eCLIP13.31□□□□□ -0.28
RNF40-211ENST00000567365 PLA2G5P39877 138 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 LHX1P48742 406 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 TRPC3Q13507 836 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 SGSM1Q2NKQ1 1148 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 KLHL40Q2TBA0 621 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 WDR72Q3MJ13 1102 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
RNF40-211ENST00000567365 KRT39Q6A163 491 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 TMC5Q6UXY8 1006 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 RNF19BQ6ZMZ0 732 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 ADGRF2Q8IZF7 708 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 ELMO3Q96BJ8 720 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 ACBD6Q9BR61 282 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 MRPL45Q9BRJ2 306 aaKnown RBP13.31□□□□□ -0.28
RNF40-211ENST00000567365 APOL5Q9BWW9 433 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 DDX43Q9NXZ2 648 aaKnown RBP13.31□□□□□ -0.28
RNF40-211ENST00000567365 HSFX1Q9UBD0 423 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 POLIQ9UNA4 740 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 DOCK8Q8NF50 2099 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 PTPRDP23468 1912 aa13.31□□□□□ -0.28
RNF40-211ENST00000567365 MTMR11A4FU01 709 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
RNF40-211ENST00000567365 PHACTR2O75167 634 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 GNA14O95837 355 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 LMO2P25791 158 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 ASPAP45381 313 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 MXI1P50539 228 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 CCDC142Q17RM4 750 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 SPOPLQ6IQ16 392 aa13.3□□□□□ -0.28
RNF40-211ENST00000567365 FAM171BQ6P995 826 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms