RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 KITP10721 976 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 ATP2A2P16615 1042 aaKnown RBP6.84□□□□□ -1.32
GINS3-206ENST00000567143 ADRA1DP25100 572 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 LIG4P49917 911 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 CCNHP51946 323 aaPredicted RBP6.84□□□□□ -1.32
GINS3-206ENST00000567143 NLRP11P59045 1033 aaKnown RBP6.84□□□□□ -1.32
GINS3-206ENST00000567143 IL9RQ01113 521 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 BRDTQ58F21 947 aaPredicted RBP6.84□□□□□ -1.32
GINS3-206ENST00000567143 ARHGEF18Q6ZSZ5 1173 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 BZW1Q7L1Q6 419 aaKnown RBP6.84□□□□□ -1.32
GINS3-206ENST00000567143 ANKRD23Q86SG2 305 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 MTDHQ86UE4 582 aaKnown RBP6.84□□□□□ -1.32
GINS3-206ENST00000567143 ERO1BQ86YB8 467 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 SCYL3Q8IZE3 742 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 MCOLN2Q8IZK6 566 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 LRRC8CQ8TDW0 803 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 FBF1Q8TES7 1133 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 CHURC1Q8WUH1 139 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 CKAP2Q8WWK9 683 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 PRR11Q96HE9 360 aaPredicted RBP6.84□□□□□ -1.32
GINS3-206ENST00000567143 MCEEQ96PE7 176 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 NUDCD1Q96RS6 583 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 RPS6KC1Q96S38 1066 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 CCDC77Q9BR77 488 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 ATP6V0A4Q9HBG4 840 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 ARMCX1Q9P291 453 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 GGA2Q9UJY4 613 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.84□□□□□ -1.32
GINS3-206ENST00000567143 AFG3L2Q9Y4W6 797 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 IVNS1ABPQ9Y6Y0 642 aa6.84□□□□□ -1.32
GINS3-206ENST00000567143 PTPRJQ12913 1337 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 A0A0G2JLL6 359 aaPredicted RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 FAM47DPA6NHR8 397 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 BHMG1C9JSJ3 638 aaPredicted RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 PLA2G6O60733 806 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 CDH16O75309 829 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 CSDE1O75534 798 aaKnown RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 ALDH1A1P00352 501 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 FDX1P10109 184 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 FGFR1P11362 822 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 CD19P15391 556 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 IVDP26440 423 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 ANXA13P27216 316 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 SGSM1Q2NKQ1 1148 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 TAF1BQ53T94 588 aaPredicted RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 WDR44Q5JSH3 913 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 NBPF12Q5TAG4 269 aaPredicted RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 FAXCQ5TGI0 409 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 SLC39A4Q6P5W5 647 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 ANO5Q75V66 913 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 TRMT10CQ7L0Y3 403 aaKnown RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 PRRT2Q7Z6L0 340 aaPredicted RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 EMC1Q8N766 993 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 GMCL1P1Q8NEA9 526 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 ATL2Q8NHH9 583 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 CENPTQ96BT3 561 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 IFT74Q96LB3 600 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 TRAIPQ9BWF2 469 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 FBXO6Q9NRD1 293 aaPredicted RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 TJP2Q9UDY2 1190 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 AGTPBP1Q9UPW5 1226 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 E2F8A0AVK6 867 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 HLA-DRAP01903 254 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 GHRP10912 638 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 GM2AP17900 193 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 ITIH2P19823 946 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 BRD2P25440 801 aaKnown RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 GNA15P30679 374 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 DRG2P55039 364 aaKnown RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 BNIP1Q12981 228 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 ALCAMQ13740 583 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 TFDP1Q14186 410 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 RCN2Q14257 317 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 CCDC6Q16204 474 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 TMEM132AQ24JP5 1023 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 CLEC16AQ2KHT3 1053 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 ARHGEF16Q5VV41 709 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 RFWD3Q6PCD5 774 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 LVRNQ6Q4G3 990 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 TMEM161BQ8NDZ6 487 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 ZNF516Q92618 1163 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 UTP4Q969X6 686 aaKnown RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 TTC17Q96AE7 1141 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 ZBTB10Q96DT7 871 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 SERPINB12Q96P63 405 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 SMC6Q96SB8 1091 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 KIAA1586Q9HCI6 787 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 NXF1Q9UBU9 619 aaKnown RBP6.83□□□□□ -1.32
GINS3-206ENST00000567143 CHKBQ9Y259 395 aa6.83□□□□□ -1.32
GINS3-206ENST00000567143 MYPNQ86TC9 1320 aa6.82□□□□□ -1.32
GINS3-206ENST00000567143 EME2A4GXA9 379 aaPredicted RBP6.82□□□□□ -1.32
GINS3-206ENST00000567143 FSCN2O14926 492 aa6.82□□□□□ -1.32
GINS3-206ENST00000567143 IGHA2P01877 340 aa6.82□□□□□ -1.32
GINS3-206ENST00000567143 CYP1A2P05177 515 aa6.82□□□□□ -1.32
GINS3-206ENST00000567143 MARK3P27448 753 aa6.82□□□□□ -1.32
GINS3-206ENST00000567143 HOXA7P31268 230 aaPredicted RBP6.82□□□□□ -1.32
GINS3-206ENST00000567143 CAP2P40123 477 aa6.82□□□□□ -1.32
GINS3-206ENST00000567143 VEGFBP49765 207 aa6.82□□□□□ -1.32
GINS3-206ENST00000567143 BASP1P80723 227 aaKnown RBP6.82□□□□□ -1.32
GINS3-206ENST00000567143 STRN3Q13033 797 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms