RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 RAB34Q9BZG1 259 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 ARRDC1-AS1Q9H2J1 176 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 SMOC1Q9H4F8 434 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 C17orf75Q9HAS0 396 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 UBQLN1Q9UMX0 589 aaKnown RBP16.83■□□□□ 0.28
PALB2-205ENST00000567003 LIMCH1Q9UPQ0 1083 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 SCN1AP35498 2009 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 EML5Q05BV3 1969 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 SEC24BO95487 1268 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 CNR2P34972 360 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 PPP2R3AQ06190 1150 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 ENOX2Q16206 610 aaKnown RBP16.82■□□□□ 0.28
PALB2-205ENST00000567003 ARHGAP29Q52LW3 1261 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 ZPBP2Q6X784 338 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 FAM212AQ96EL1 285 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 SENP8Q96LD8 212 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 SEPT5Q99719 369 aaPredicted RBP16.82■□□□□ 0.28
PALB2-205ENST00000567003 LLPHQ9BRT6 129 aaKnown RBP16.82■□□□□ 0.28
PALB2-205ENST00000567003 SSUH2Q9Y2M2 353 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 STK24Q9Y6E0 443 aa16.82■□□□□ 0.28
PALB2-205ENST00000567003 ATF6P18850 670 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 TYMPP19971 482 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 CYP3A5P20815 502 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 SLC12A3P55017 1021 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 MYBPC2Q14324 1141 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 SLC39A12Q504Y0 691 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 ARHGAP15Q53QZ3 475 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 C1orf228Q6PIY5 440 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 DTHD1Q6ZMT9 781 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 KBTBD6Q86V97 674 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 BPIFB1Q8TDL5 484 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 GIPC2Q8TF65 315 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 TIPINQ9BVW5 301 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 PLEKHA5Q9HAU0 1116 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 IL21Q9HBE4 155 aa16.81■□□□□ 0.28
PALB2-205ENST00000567003 ZNF638Q14966 1978 aaKnown RBP16.8■□□□□ 0.28
PALB2-205ENST00000567003 FAM189A1O60320 539 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 NFICP08651 508 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 PLA2G4BP0C869 781 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 ODC1P11926 461 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 U2AF2P26368 475 aaKnown RBP eCLIP16.8■□□□□ 0.28
PALB2-205ENST00000567003 LIG4P49917 911 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 SMTNP53814 917 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 LILRA4P59901 499 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 MGAT5BQ3V5L5 792 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 N4BP2L1Q5TBK1 243 aaPredicted RBP16.8■□□□□ 0.28
PALB2-205ENST00000567003 TRIM68Q6AZZ1 485 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 IL31Q6EBC2 164 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 JADE1Q6IE81 842 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 HAUS6Q7Z4H7 955 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 SYT2Q8N9I0 419 aaPredicted RBP16.8■□□□□ 0.28
PALB2-205ENST00000567003 STKLD1Q8NE28 680 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 OXCT2Q9BYC2 517 aaPredicted RBP16.8■□□□□ 0.28
PALB2-205ENST00000567003 TASP1Q9H6P5 420 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 RALYQ9UKM9 306 aaKnown RBP16.8■□□□□ 0.28
PALB2-205ENST00000567003 ASB3Q9Y575 518 aa16.8■□□□□ 0.28
PALB2-205ENST00000567003 TCHHQ07283 1943 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 DENND4CQ5VZ89 1909 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 NCKAP1LP55160 1127 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 HMGN5P82970 282 aaKnown RBP16.79■□□□□ 0.28
PALB2-205ENST00000567003 ITPRIPL2Q3MIP1 535 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 ARSHQ5FYA8 562 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 SPATA1Q5VX52 437 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 C9orf57Q5W0N0 161 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
PALB2-205ENST00000567003 FSTL4Q6MZW2 842 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 ARMCX5Q6P1M9 558 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 CHFRQ96EP1 664 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 SLC46A2Q9BY10 475 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 RPF1Q9H9Y2 349 aaKnown RBP16.79■□□□□ 0.28
PALB2-205ENST00000567003 HPS4Q9NQG7 708 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.79■□□□□ 0.28
PALB2-205ENST00000567003 OBP2AQ9NY56 170 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 CCL26Q9Y258 94 aa16.79■□□□□ 0.28
PALB2-205ENST00000567003 OBSL1O75147 1896 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 OTOL1A6NHN0 477 aaPredicted RBP16.78■□□□□ 0.28
PALB2-205ENST00000567003 HNRNPDLO14979 420 aaKnown RBP16.78■□□□□ 0.28
PALB2-205ENST00000567003 RPP40O75818 363 aaKnown RBP16.78■□□□□ 0.28
PALB2-205ENST00000567003 EPN2O95208 641 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 NMT1P30419 496 aaKnown RBP16.78■□□□□ 0.28
PALB2-205ENST00000567003 PRPHP41219 470 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 MCM2P49736 904 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 HYIQ5T013 277 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 C12orf50Q8NA57 414 aaPredicted RBP16.78■□□□□ 0.28
PALB2-205ENST00000567003 RIN3Q8TB24 985 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 LRRC15Q8TF66 581 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 GAB3Q8WWW8 586 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 ZCWPW1Q9H0M4 648 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 EBF3Q9H4W6 596 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 GKN1Q9NS71 199 aa16.78■□□□□ 0.28
PALB2-205ENST00000567003 VWA3AA6NCI4 1184 aa16.77■□□□□ 0.28
PALB2-205ENST00000567003 K7ENM7 598 aa16.77■□□□□ 0.28
PALB2-205ENST00000567003 OGTO15294 1046 aa16.77■□□□□ 0.28
PALB2-205ENST00000567003 XPOTO43592 962 aaKnown RBP16.77■□□□□ 0.28
PALB2-205ENST00000567003 FGF19O95750 216 aa16.77■□□□□ 0.28
PALB2-205ENST00000567003 EGFP01133 1207 aa16.77■□□□□ 0.28
PALB2-205ENST00000567003 CCDC192P0DO97 292 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms