RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CRELD2Q6UXH1 353 aaPredicted RBP16.21■□□□□ 0.19
RNF40-209ENST00000566703 USP49Q70CQ1 688 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 GAREM2Q75VX8 874 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 ARID3BQ8IVW6 561 aaPredicted RBP16.21■□□□□ 0.19
RNF40-209ENST00000566703 KIAA2013Q8IYS2 634 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 OR10T2Q8NGX3 314 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 SPPL2BQ8TCT7 592 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 POMGNT1Q8WZA1 660 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 SECISBP2LQ93073 1101 aaKnown RBP16.21■□□□□ 0.19
RNF40-209ENST00000566703 TMEM209Q96SK2 561 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 EPC1Q9H2F5 836 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 ATXN3LQ9H3M9 355 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 ZMYM5Q9UJ78 669 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 CLIC4Q9Y696 253 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 USP34Q70CQ2 3546 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 MIA3Q5JRA6 1907 aa16.21■□□□□ 0.19
RNF40-209ENST00000566703 FANCMQ8IYD8 2048 aa16.21■□□□□ 0.18
RNF40-209ENST00000566703 VPS37CA5D8V6 355 aaPredicted RBP16.2■□□□□ 0.18
RNF40-209ENST00000566703 LDHAP00338 332 aaKnown RBP16.2■□□□□ 0.18
RNF40-209ENST00000566703 CHRNB1P11230 501 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 TXLNAP40222 546 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 PNPLA4P41247 253 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 CCR3P51677 355 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 PUM1Q14671 1186 aaKnown RBP eCLIP16.2■□□□□ 0.18
RNF40-209ENST00000566703 VEPH1Q14D04 833 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 ARHGAP29Q52LW3 1261 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 SV2BQ7L1I2 683 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 DYMQ7RTS9 669 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 SFR1Q86XK3 245 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 PYM1Q9BRP8 204 aaKnown RBP16.2■□□□□ 0.18
RNF40-209ENST00000566703 MKNK1Q9BUB5 465 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 TASP1Q9H6P5 420 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 FBXO2Q9UK22 296 aaPredicted RBP16.2■□□□□ 0.18
RNF40-209ENST00000566703 PCDHB13Q9Y5F0 798 aa16.2■□□□□ 0.18
RNF40-209ENST00000566703 COL4A3Q01955 1670 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 KPNA7A9QM74 516 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 TISP43B9A030 160 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 DPYSL4O14531 572 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 CCNE1P24864 410 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 GABRR2P28476 465 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 CDC25CP30307 473 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 ADSSP30520 456 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 ALCAMQ13740 583 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 SV2CQ496J9 727 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 GPR158Q5T848 1215 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 DCP1BQ8IZD4 617 aaKnown RBP16.19■□□□□ 0.18
RNF40-209ENST00000566703 DCLK2Q8N568 766 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 TTC9BQ8N6N2 239 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 DNAJC19Q96DA6 116 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 RMDN1Q96DB5 314 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 RSPRY1Q96DX4 576 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 ACCSQ96QU6 501 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 MRPL44Q9H9J2 332 aaKnown RBP16.19■□□□□ 0.18
RNF40-209ENST00000566703 OLFML3Q9NRN5 406 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 NCDNQ9UBB6 729 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 NCANO14594 1321 aa16.19■□□□□ 0.18
RNF40-209ENST00000566703 MYBPHLA2RUH7 354 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 MYMKA6NI61 221 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 SOBPA7XYQ1 873 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 HAPLN1P10915 354 aaPredicted RBP16.18■□□□□ 0.18
RNF40-209ENST00000566703 TDGF1P13385 188 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 SDHBP21912 280 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 GARTP22102 1010 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 CXCL12P48061 93 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 KPNA1P52294 538 aaPredicted RBP16.18■□□□□ 0.18
RNF40-209ENST00000566703 PLCB2Q00722 1185 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 RESTQ13127 1097 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 LRRC32Q14392 662 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 MGAT5BQ3V5L5 792 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 SLC39A12Q504Y0 691 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
RNF40-209ENST00000566703 WSCD1Q658N2 575 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 TSSK4Q6SA08 328 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 CCDC73Q6ZRK6 1079 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 RALGPS2Q86X27 583 aaPredicted RBP16.18■□□□□ 0.18
RNF40-209ENST00000566703 SPEM1Q8N4L4 309 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 CELF5Q8N6W0 485 aaKnown RBP16.18■□□□□ 0.18
RNF40-209ENST00000566703 FAM200AQ8TCP9 573 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 CACTINQ8WUQ7 758 aaKnown RBP16.18■□□□□ 0.18
RNF40-209ENST00000566703 ZNF560Q96MR9 790 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 IL21Q9HBE4 155 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 DLL3Q9NYJ7 618 aa16.18■□□□□ 0.18
RNF40-209ENST00000566703 SYT1P21579 422 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 TAF12Q16514 161 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 NFE2Q16621 373 aaPredicted RBP16.17■□□□□ 0.18
RNF40-209ENST00000566703 DGKKQ5KSL6 1271 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 STXBP5Q5T5C0 1151 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 LRRTM3Q86VH5 581 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 BRSK2Q8IWQ3 736 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 EFCAB13Q8IY85 973 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 SPATA18Q8TC71 538 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 BPIFB1Q8TDL5 484 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 INTS4Q96HW7 963 aaKnown RBP16.17■□□□□ 0.18
RNF40-209ENST00000566703 LRRC3BQ96PB8 259 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 GCNAQ96QF7 691 aa16.17■□□□□ 0.18
RNF40-209ENST00000566703 SEPT5Q99719 369 aaPredicted RBP16.17■□□□□ 0.18
RNF40-209ENST00000566703 THG1LQ9NWX6 298 aaKnown RBP16.17■□□□□ 0.18
RNF40-209ENST00000566703 SMG5Q9UPR3 1016 aaKnown RBP16.17■□□□□ 0.18
RNF40-209ENST00000566703 FRMD3A2A2Y4 597 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms