RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 DYNC1LI2O43237 492 aaPredicted RBP12.2□□□□□ -0.46
CDH1-210ENST00000566612 RIPK2O43353 540 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 ZNF862O60290 1169 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 ZSCAN5DPP0CG00 497 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 KITP10721 976 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 TAP1Q03518 808 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 DNAJC3Q13217 504 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 MFSD7Q6UXD7 560 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 CPB2Q96IY4 423 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 LRRC37BQ96QE4 947 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 ROPN1BQ9BZX4 212 aaPredicted RBP12.2□□□□□ -0.46
CDH1-210ENST00000566612 ECT2Q9H8V3 914 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 ROPN1Q9HAT0 212 aaPredicted RBP12.2□□□□□ -0.46
CDH1-210ENST00000566612 RNF19AQ9NV58 838 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDH1-210ENST00000566612 ERAP1Q9NZ08 941 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 ASB14A6NK59 587 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 HBP1O60381 514 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 MMP14P50281 582 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 CENPCQ03188 943 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 PSMD6Q15008 389 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 TDRD10Q5VZ19 366 aaKnown RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 HACE1Q8IYU2 909 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 SAMD3Q8N6K7 520 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 WNK4Q96J92 1243 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 SMYD2Q9NRG4 433 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 USP15Q9Y4E8 981 aaPredicted RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 CCDC195A0A1B0GUA6 201 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 ADCY3O60266 1144 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 KRT37O76014 449 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 GJB1P08034 283 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 UBA1P22314 1058 aaKnown RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 TNFRSF8P28908 595 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 RBP5P82980 135 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 TMPRSS15P98073 1019 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 FASTKD5Q7L8L6 764 aaKnown RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 ZNF526Q8TF50 670 aaPredicted RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 IFT122Q9HBG6 1241 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 DMAC2Q9NW81 257 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 SAE1Q9UBE0 346 aaPredicted RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 DDX20Q9UHI6 824 aaKnown RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 XPO7Q9UIA9 1087 aaKnown RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 A0A087WZ62 844 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 CCT8L1PA6NM43 557 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 ADM5C9JUS6 153 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 CHUKO15111 745 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 MYL3P08590 195 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 TNFSF9P41273 254 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 ALDH5A1P51649 535 aaPredicted RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 SKOR1P84550 965 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 NME3Q13232 169 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 SDCCAG8Q86SQ7 713 aaPredicted RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 CCDC125Q86Z20 511 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 PPP1R13LQ8WUF5 828 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 DEPDC1BQ8WUY9 529 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 FDXACB1Q9BRP7 624 aaPredicted RBP12.19□□□□□ -0.46
CDH1-210ENST00000566612 DCLK3Q9C098 648 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDH1-210ENST00000566612 POLIQ9UNA4 740 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 NCANO14594 1321 aa12.19□□□□□ -0.46
CDH1-210ENST00000566612 FAM47DPA6NHR8 397 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 PSTPIP1O43586 416 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 EDIL3O43854 480 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 HUS1O60921 280 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 TTC4O95801 387 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 BAG2O95816 211 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 CA8P35219 290 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 ERFP50548 548 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 OTUD4Q01804 1114 aaKnown RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 NR1H3Q13133 447 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 GEN1Q17RS7 908 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 METTL7BQ6UX53 244 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 TRPM8Q7Z2W7 1104 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 CFAP61Q8NHU2 1237 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 PPP4R1Q8TF05 950 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 COPS5Q92905 334 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 CTNNAL1Q9UBT7 734 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 DDX3YO15523 660 aaKnown RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 NCKAP1LP55160 1127 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 ITKQ08881 620 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 KLHL38Q2WGJ6 581 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 DUPD1Q68J44 220 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 GBP7Q8N8V2 638 aaPredicted RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 ACTL9Q8TC94 416 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 PORCNQ9H237 461 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 TXLNGQ9NUQ3 528 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 PRMT7Q9NVM4 692 aaPredicted RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 GPATCH2LQ9NWQ4 482 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 WHRNQ9P202 907 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 G3BP2Q9UN86 482 aaKnown RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 ADAMTS7Q9UKP4 1686 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 LPXNO60711 386 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 CTCFP49711 727 aaPredicted RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 RPL7AP62424 266 aaKnown RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 KIZQ2M2Z5 673 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms