RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 LMAN2LQ9H0V9 348 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 ZBP1Q9H171 429 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 GDAP2Q9NXN4 497 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 NXF1Q9UBU9 619 aaKnown RBP12.31□□□□□ -0.44
KARS-207ENST00000566560 LAMA2P24043 3122 aaKnown RBP12.3□□□□□ -0.44
KARS-207ENST00000566560 GTPBP10A4D1E9 387 aaKnown RBP12.3□□□□□ -0.44
KARS-207ENST00000566560 C2CD2LO14523 706 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 CYB561D2O14569 222 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 HUS1O60921 280 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 LRRN2O75325 713 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 EFEMP2O95967 443 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 CTSAP10619 480 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 P4HA1P13674 534 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 FGFR3P22607 806 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 DNAJB1P25685 340 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 LRMPQ12912 555 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 BMS1Q14692 1282 aaKnown RBP12.3□□□□□ -0.44
KARS-207ENST00000566560 EXOC3L4Q17RC7 722 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 WDR44Q5JSH3 913 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 RTP2Q5QGT7 225 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 PLPP4Q5VZY2 271 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 GBP6Q6ZN66 633 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 APTXQ7Z2E3 356 aaKnown RBP12.3□□□□□ -0.44
KARS-207ENST00000566560 GAS2L3Q86XJ1 694 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 ADGRF2Q8IZF7 708 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 TOP6BLQ8N6T0 577 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 APPL2Q8NEU8 664 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 FAM161BQ96MY7 647 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 INTS2Q9H0H0 1204 aaKnown RBP12.3□□□□□ -0.44
KARS-207ENST00000566560 PRDM12Q9H4Q4 367 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 SMYD3Q9H7B4 428 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
KARS-207ENST00000566560 DSEQ9UL01 958 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 L1RE1Q9UN81 338 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 POLIQ9UNA4 740 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 TIMM13Q9Y5L4 95 aaPredicted RBP12.3□□□□□ -0.44
KARS-207ENST00000566560 CHD9Q3L8U1 2897 aa12.3□□□□□ -0.44
KARS-207ENST00000566560 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.29□□□□□ -0.44
KARS-207ENST00000566560 RFXAPO00287 272 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 LPXNO60711 386 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 TYMPP19971 482 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 IRS1P35568 1242 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 ASPAP45381 313 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 RAP1GAPP47736 663 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 FANCCQ00597 558 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 DSG1Q02413 1049 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 YWHAHQ04917 246 aaPredicted RBP12.29□□□□□ -0.44
KARS-207ENST00000566560 SMC1AQ14683 1233 aaKnown RBP12.29□□□□□ -0.44
KARS-207ENST00000566560 GRIN2CQ14957 1233 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 PTPN14Q15678 1187 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 PTPROQ16827 1216 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 FILIP1LQ4L180 1135 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 WSCD1Q658N2 575 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 ZNF280DQ6N043 979 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 PDXDC1Q6P996 788 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 TRIM65Q6PJ69 517 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 TAS1R1Q7RTX1 841 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 TMC7Q7Z402 723 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 METTL23Q86XA0 190 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 PDCL2Q8N4E4 241 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 AUTS2Q8WXX7 1259 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 RIN2Q8WYP3 895 aaPredicted RBP12.29□□□□□ -0.44
KARS-207ENST00000566560 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 RBSNQ9H1K0 784 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 MRPL17Q9NRX2 175 aaKnown RBP12.29□□□□□ -0.44
KARS-207ENST00000566560 CHST7Q9NS84 486 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 PCDHGC5Q9Y5F6 944 aa12.29□□□□□ -0.44
KARS-207ENST00000566560 PRRC2BQ5JSZ5 2229 aaKnown RBP12.29□□□□□ -0.44
KARS-207ENST00000566560 A0A1B0GTH6 734 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 SMAPO00193 183 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 FSCN2O14926 492 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 HRO43593 1189 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 CYP11A1P05108 521 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 FXR1P51114 621 aaKnown RBP eCLIP12.28□□□□□ -0.44
KARS-207ENST00000566560 ERVFC1P60507 584 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 CREMQ03060 361 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 UBXN1Q04323 297 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 CUL2Q13617 745 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 CAMK1Q14012 370 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 PSMD5Q16401 504 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 SOWAHAQ2M3V2 549 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 OVOS1Q6IE37 1185 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 PRSS55Q6UWB4 352 aaPredicted RBP12.28□□□□□ -0.44
KARS-207ENST00000566560 ANKS3Q6ZW76 656 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 Q7L0L9 218 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 TMEM86AQ8N2M4 240 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 EHBP1Q8NDI1 1231 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 LMO3Q8TAP4 145 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 SPATA18Q8TC71 538 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 MRPL38Q96DV4 380 aaKnown RBP12.28□□□□□ -0.44
KARS-207ENST00000566560 ARID3AQ99856 593 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 LSM14BQ9BX40 385 aaKnown RBP12.28□□□□□ -0.44
KARS-207ENST00000566560 NGRNQ9NPE2 291 aaKnown RBP12.28□□□□□ -0.44
KARS-207ENST00000566560 MTRRQ9UBK8 725 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 SSX2IPQ9Y2D8 614 aa12.28□□□□□ -0.44
KARS-207ENST00000566560 CHD7Q9P2D1 2997 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms