RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 HMGXB4Q9UGU5 601 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 LACTBL1A8MY62 500 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 GOLGA8SH3BPF8 625 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 PPFIA4O75335 1185 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 ITGB3P05106 788 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 SLC1A1P43005 524 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 TMEM62Q0P6H9 643 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 MAMDC4Q6UXC1 1216 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 TRIM72Q6ZMU5 477 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 C1orf127Q8N9H9 656 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 ANKRD36BP1Q96IX9 119 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 PLVAPQ9BX97 442 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 PARVAQ9NVD7 372 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 SIX4Q9UIU6 781 aa12.97□□□□□ -0.33
SCAMP2-207ENST00000566480 ASB14A6NK59 587 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 BTBD19C9JJ37 291 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 TP73O15350 636 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 GAS2O43903 313 aaKnown RBP12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 TNNC2P02585 160 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 STAG3L1P0CL83 205 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 ANK1P16157 1881 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 ATF7P17544 494 aaPredicted RBP12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 LSP1P33241 339 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 DRG2P55039 364 aaKnown RBP12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 LACTBP83111 547 aaPredicted RBP12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 JADE1Q6IE81 842 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 DENND1BQ6P3S1 775 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 DCUN1D2Q6PH85 259 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 HAUS1Q96CS2 278 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 SCLT1Q96NL6 688 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 TWNKQ96RR1 684 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 SDCBP2Q9H190 292 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 PABPC3Q9H361 631 aaKnown RBP12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 PPANQ9NQ55 473 aaKnown RBP12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
SCAMP2-207ENST00000566480 PIK3R2O00459 728 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 CHKAP35790 457 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 FNTAP49354 379 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 LDLRAD1Q5T700 205 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 DENND2CQ68D51 928 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 DNAJC24Q6P3W2 148 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 OSBPL8Q9BZF1 889 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 DCLK3Q9C098 648 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 CXCL16Q9H2A7 254 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 SMYD3Q9H7B4 428 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 CYTH4Q9UIA0 394 aa12.96□□□□□ -0.34
SCAMP2-207ENST00000566480 CCL15-CCL14A0A0B4J2E2 113 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 TRIM66O15016 1216 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 ARF4P18085 180 aaPredicted RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 MDH1P40925 334 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 SLC26A2P50443 739 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 AP3M2P53677 418 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 CCL15Q16663 113 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 ZNF792Q3KQV3 632 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 RUFY4Q6ZNE9 571 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 ERICH1Q86X53 443 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 C12orf50Q8NA57 414 aaPredicted RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 MDM1Q8TC05 714 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 EPS8L3Q8TE67 593 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 NLRP7Q8WX94 980 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 ART4Q93070 314 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 MTRF1LQ9UGC7 380 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 SCINQ9Y6U3 715 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 TMEM191CA6NGB0 347 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 B4GALT4O60513 344 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 ACSL3O95573 720 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 CALCOCO2Q13137 446 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 KLF1Q13351 362 aaPredicted RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 SMTNL2Q2TAL5 461 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 FAM182AQ5T1J6 154 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 EMC1Q8N766 993 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 TMEM35BQ8NCS4 154 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 VCPIP1Q96JH7 1222 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 TNFSF13BQ9Y275 285 aa12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 RRP15Q9Y3B9 282 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-207ENST00000566480 PLXNA1Q9UIW2 1896 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 NDUFAB1O14561 156 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 SNAI1O95863 264 aaPredicted RBP12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 ADCY8P40145 1251 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 LAMC2Q13753 1193 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 AMHR2Q16671 573 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 PTPN20Q4JDL3 420 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 ZNF667Q5HYK9 610 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 KCNT1Q5JUK3 1230 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 CYP4F22Q6NT55 531 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 MFSD7Q6UXD7 560 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 DPP9Q86TI2 863 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 KIAA0319LQ8IZA0 1049 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 GLIS1Q8NBF1 620 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 BRI3BPQ8WY22 251 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 MS4A4AQ96JQ5 239 aa12.94□□□□□ -0.34
SCAMP2-207ENST00000566480 C16orf70Q9BSU1 422 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms