RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 BRD9Q9H8M2 597 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 TRPV4Q9HBA0 871 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 ZNF334Q9HCZ1 680 aaPredicted RBP19.79■□□□□ 0.76
USB1-213ENST00000566292 TFIP11Q9UBB9 837 aaKnown RBP19.79■□□□□ 0.76
USB1-213ENST00000566292 DSEQ9UL01 958 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 R4GN57 208 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 SPTLC2O15270 562 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 PRPF6O94906 941 aaKnown RBP19.78■□□□□ 0.76
USB1-213ENST00000566292 SP9P0CG40 484 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 GARTP22102 1010 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 ALCAMQ13740 583 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 SLC39A12Q504Y0 691 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 STXBP5Q5T5C0 1151 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 SCARA3Q6AZY7 606 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 GAREM2Q75VX8 874 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 DNAJB7Q7Z6W7 309 aaPredicted RBP19.78■□□□□ 0.76
USB1-213ENST00000566292 LRRTM3Q86VH5 581 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 SYCP3Q8IZU3 236 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 SNX21Q969T3 373 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 PSMG2Q969U7 264 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 FAM84AQ96KN4 292 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 TRMT61BQ9BVS5 477 aaKnown RBP19.78■□□□□ 0.76
USB1-213ENST00000566292 HSFX1Q9UBD0 423 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 ASB3Q9Y575 518 aa19.78■□□□□ 0.76
USB1-213ENST00000566292 OBSL1O75147 1896 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 ZNF292O60281 2723 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 GOLGA8IPA6NC78 632 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 GOLGA8JA6NMD2 632 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 KPNA7A9QM74 516 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 PPP6R2O75170 966 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 PSMC3P17980 439 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 TFAMQ00059 246 aaKnown RBP19.77■□□□□ 0.76
USB1-213ENST00000566292 FZD5Q13467 585 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 SV2CQ496J9 727 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 METTL23Q86XA0 190 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 GLIS3Q8NEA6 775 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 RSPRY1Q96DX4 576 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 LPIN3Q9BQK8 851 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 MKNK1Q9BUB5 465 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 BCO2Q9BYV7 579 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 GPR88Q9GZN0 384 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 PCIF1Q9H4Z3 704 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 SLITRK6Q9H5Y7 841 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 KBTBD4Q9NVX7 518 aa19.77■□□□□ 0.76
USB1-213ENST00000566292 RBAKQ9NYW8 714 aaPredicted RBP19.77■□□□□ 0.76
USB1-213ENST00000566292 KIF26AQ9ULI4 1882 aaPredicted RBP19.76■□□□□ 0.75
USB1-213ENST00000566292 HEPACAM2A8MVW5 462 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 EXTL3O43909 919 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 LDHAP00338 332 aaKnown RBP19.76■□□□□ 0.75
USB1-213ENST00000566292 ATF6P18850 670 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 POLR2BP30876 1174 aaKnown RBP19.76■□□□□ 0.75
USB1-213ENST00000566292 GDI1P31150 447 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 FOXD4L5Q5VV16 416 aaPredicted RBP19.76■□□□□ 0.75
USB1-213ENST00000566292 ZNF852Q6ZMS4 543 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 MFSD6LQ8IWD5 586 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 CCDC65Q8IXS2 484 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 C1orf127Q8N9H9 656 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 CXorf38Q8TB03 319 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 DEPDC1BQ8WUY9 529 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 FOXD4L4Q8WXT5 416 aaPredicted RBP19.76■□□□□ 0.75
USB1-213ENST00000566292 IRF7Q92985 503 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 HPS3Q969F9 1004 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 CLDN23Q96B33 292 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 ZNF560Q96MR9 790 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 ZNF396Q96N95 335 aaPredicted RBP19.76■□□□□ 0.75
USB1-213ENST00000566292 SEPT5Q99719 369 aaPredicted RBP19.76■□□□□ 0.75
USB1-213ENST00000566292 TNMDQ9H2S6 317 aa19.76■□□□□ 0.75
USB1-213ENST00000566292 EP300Q09472 2414 aaPredicted RBP19.76■□□□□ 0.75
USB1-213ENST00000566292 TULP1O00294 542 aaPredicted RBP19.75■□□□□ 0.75
USB1-213ENST00000566292 YEATS4O95619 227 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 ITGB3P05106 788 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 TUFMP49411 452 aaKnown RBP19.75■□□□□ 0.75
USB1-213ENST00000566292 MGAT5BQ3V5L5 792 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 SHC4Q6S5L8 630 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 ADSSL1Q8N142 457 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 ZNF687Q8N1G0 1237 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 THEM5Q8N1Q8 247 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 NELL2Q99435 816 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 TRIM9Q9C026 710 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 TMEM206Q9H813 350 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 TRPV5Q9NQA5 729 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 SPATA6Q9NWH7 488 aaPredicted RBP19.75■□□□□ 0.75
USB1-213ENST00000566292 AGAP1Q9UPQ3 857 aa19.75■□□□□ 0.75
USB1-213ENST00000566292 ZNF638Q14966 1978 aaKnown RBP19.75■□□□□ 0.75
USB1-213ENST00000566292 ARNTLO00327 626 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 GABRR2P28476 465 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 HOXD13P35453 343 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 PNPLA4P41247 253 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 MAGEA9P43362 315 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 ITIH5Q86UX2 942 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 GPIHBP1Q8IV16 184 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 ARID3BQ8IVW6 561 aaPredicted RBP19.74■□□□□ 0.75
USB1-213ENST00000566292 NOC3LQ8WTT2 800 aaKnown RBP19.74■□□□□ 0.75
USB1-213ENST00000566292 DHX58Q96C10 678 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 ATXN3LQ9H3M9 355 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 SEMA4AQ9H3S1 761 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 IL21Q9HBE4 155 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 PDE11AQ9HCR9 933 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 TMLHEQ9NVH6 421 aa19.74■□□□□ 0.75
USB1-213ENST00000566292 L1RE1Q9UN81 338 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms