RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 DHTKD1Q96HY7 919 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 TSG101Q99816 390 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 EPHX3Q9H6B9 360 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 CYP4F11Q9HBI6 524 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 CLUHO75153 1309 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 PRRG1O14668 218 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 CCL16O15467 120 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 DCXO43602 365 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 SEC24AO95486 1093 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 DLG4P78352 724 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 CLDN10P78369 228 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 LRRC63Q05C16 580 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 BFSP1Q12934 665 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 WSCD1Q658N2 575 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 KLHL10Q6JEL2 608 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 RNF19BQ6ZMZ0 732 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 ZC3H3Q8IXZ2 948 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 ZDHHC14Q8IZN3 488 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 TDRD5Q8NAT2 981 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 TMC2Q8TDI7 906 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 GDAP2Q9NXN4 497 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 POLIQ9UNA4 740 aa14.87□□□□□ -0.03
HERPUD1-210ENST00000565966 CETN3O15182 167 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 HUS1O60921 280 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 CST3P01034 146 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 LRG1P02750 347 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 OR4Q2P0C623 313 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 PSMC2P35998 433 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 AP3M2P53677 418 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 FKBP3Q00688 224 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 C1orf220Q5T0J3 134 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 DPH6Q7L8W6 267 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 GRASPQ7Z6J2 395 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 TMEM86AQ8N2M4 240 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 EEF2KMTQ96G04 330 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 HPDLQ96IR7 371 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 DUSP9Q99956 384 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 MKNK1Q9BUB5 465 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 C1QTNF1Q9BXJ1 281 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 MUTYHQ9UIF7 546 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 SNX9Q9Y5X1 595 aa14.86□□□□□ -0.03
HERPUD1-210ENST00000565966 MBD3O95983 291 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 C4BPAP04003 597 aaKnown RBP14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 GBP2P32456 591 aaPredicted RBP14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 VAMP7P51809 220 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 MCCD1P59942 119 aaPredicted RBP14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 TTI2Q6NXR4 508 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 FOXR2Q6PJQ5 311 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 INTS8Q75QN2 995 aaKnown RBP14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 TOP6BLQ8N6T0 577 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 OR10T2Q8NGX3 314 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 SPATA18Q8TC71 538 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 PGLYRP2Q96PD5 576 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 TMEM209Q96SK2 561 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 RTP3Q9BQQ7 232 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 ZCWPW1Q9H0M4 648 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 DNMT3BQ9UBC3 853 aaKnown RBP14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 LIMD1Q9UGP4 676 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 L1RE1Q9UN81 338 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 CTNND2Q9UQB3 1225 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 INSL5Q9Y5Q6 135 aa14.85□□□□□ -0.03
HERPUD1-210ENST00000565966 TECTAO75443 2155 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 MTMR11A4FU01 709 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 IKBKBO14920 756 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 N4BP1O75113 896 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 PHACTR2O75167 634 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 VNN2O95498 520 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 KRT13P13646 458 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 PTPN2P17706 415 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 FSHRP23945 695 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 LHX1P48742 406 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 STX17P56962 302 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 MYL7Q01449 175 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 ENPEPQ07075 957 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 SMARCB1Q12824 385 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 DUSP4Q13115 394 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 PAK1Q13153 545 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 TRPC3Q13507 836 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 TDRD10Q5VZ19 366 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 DCP1BQ8IZD4 617 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 ELMOD1Q8N336 334 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 PDCL2Q8N4E4 241 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 ACBD6Q9BR61 282 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 HSFX1Q9UBD0 423 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 TRIOO75962 3097 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 DENND4CQ5VZ89 1909 aa14.84□□□□□ -0.03
HERPUD1-210ENST00000565966 BICDL2A1A5D9 508 aa14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 SLC16A3O15427 465 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 VNN1O95497 513 aa14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 TRIM49P0CI25 452 aa14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 TRIM49CP0CI26 452 aa14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 EPB41P11171 864 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 ATICP31939 592 aa14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 MYL6P60660 151 aa14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 NTHL1P78549 312 aa14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 TSPY1Q01534 308 aa14.83□□□□□ -0.04
HERPUD1-210ENST00000565966 TWF1Q12792 350 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms