RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 SPATA20Q8TB22 786 aa20.1■□□□□ 0.81
CMTM3-210ENST00000565666 PLEKHO2Q8TD55 490 aa20.1■□□□□ 0.81
CMTM3-210ENST00000565666 ZNF516Q92618 1163 aa20.1■□□□□ 0.81
CMTM3-210ENST00000565666 ZCWPW1Q9H0M4 648 aa20.1■□□□□ 0.81
CMTM3-210ENST00000565666 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-210ENST00000565666 HCFC1R1Q9NWW0 138 aa20.1■□□□□ 0.81
CMTM3-210ENST00000565666 DNMT3BQ9UBC3 853 aaKnown RBP20.1■□□□□ 0.81
CMTM3-210ENST00000565666 LIMD1Q9UGP4 676 aa20.1■□□□□ 0.81
CMTM3-210ENST00000565666 MTMR11A4FU01 709 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 CST3P01034 146 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-210ENST00000565666 PTPN2P17706 415 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 MYL7Q01449 175 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 TSPY1Q01534 308 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 TWF1Q12792 350 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 DUSP4Q13115 394 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 STIM1Q13586 685 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 EDRF1Q3B7T1 1238 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 PABPC1LQ4VXU2 614 aaKnown RBP20.09■□□□□ 0.81
CMTM3-210ENST00000565666 FAM186BQ8IYM0 893 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 DCP1BQ8IZD4 617 aaKnown RBP20.09■□□□□ 0.81
CMTM3-210ENST00000565666 TOP6BLQ8N6T0 577 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 TMC2Q8TDI7 906 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 MMS19Q96T76 1030 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 TSG101Q99816 390 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 RTP3Q9BQQ7 232 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 DDX43Q9NXZ2 648 aaKnown RBP20.09■□□□□ 0.81
CMTM3-210ENST00000565666 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■■■□ 20.6
CMTM3-210ENST00000565666 YIPF1Q9Y548 306 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 BDP1A6H8Y1 2624 aa20.09■□□□□ 0.81
CMTM3-210ENST00000565666 MAPK13O15264 365 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 N4BP1O75113 896 aaKnown RBP20.08■□□□□ 0.81
CMTM3-210ENST00000565666 KRT13P13646 458 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 PSMC2P35998 433 aaKnown RBP20.08■□□□□ 0.81
CMTM3-210ENST00000565666 LHX1P48742 406 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 DLG4P78352 724 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 PLD1Q13393 1074 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 PTPN21Q16825 1174 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 ZCWPW2Q504Y3 356 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 COBLL1Q53SF7 1204 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 IQCEQ6IPM2 695 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 CENPPQ6IPU0 288 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 DPH6Q7L8W6 267 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 ATAD1Q8NBU5 361 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 SPATA18Q8TC71 538 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 ZNF512Q96ME7 567 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-210ENST00000565666 MYADMQ96S97 322 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 CORO1BQ9BR76 489 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 MAN1B1Q9UKM7 699 aa20.08■□□□□ 0.81
CMTM3-210ENST00000565666 AKAP3O75969 853 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 VNN2O95498 520 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 ASGR2P07307 311 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 RHOP08100 348 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 ALDH1A3P47895 512 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 VAMP7P51809 220 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 CDR1P51861 262 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 MYL6P60660 151 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 TNNC1P63316 161 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 SMARCB1Q12824 385 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 SOWAHAQ2M3V2 549 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 TDRD10Q5VZ19 366 aaKnown RBP20.07■□□□□ 0.8
CMTM3-210ENST00000565666 INTS8Q75QN2 995 aaKnown RBP20.07■□□□□ 0.8
CMTM3-210ENST00000565666 SYAP1Q96A49 352 aaPredicted RBP20.07■□□□□ 0.8
CMTM3-210ENST00000565666 CRISPLD1Q9H336 500 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 SLC27A5Q9Y2P5 690 aa20.07■□□□□ 0.8
CMTM3-210ENST00000565666 MRPS23Q9Y3D9 190 aaKnown RBP20.07■□□□□ 0.8
CMTM3-210ENST00000565666 PSMA7O14818 248 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 CETN3O15182 167 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 ACAT1P24752 427 aaKnown RBP20.06■□□□□ 0.8
CMTM3-210ENST00000565666 PCSK1P29120 753 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 ATICP31939 592 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 EPHB3P54753 998 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 CLDN10P78369 228 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 WDR72Q3MJ13 1102 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 MGAT5BQ3V5L5 792 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 OSTM1Q86WC4 334 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 ADSSL1Q8N142 457 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 TTC9BQ8N6N2 239 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 ITFG1Q8TB96 612 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 C2orf15Q8WU43 125 aaKnown RBP20.06■□□□□ 0.8
CMTM3-210ENST00000565666 EDAQ92838 391 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 IPO9Q96P70 1041 aaKnown RBP20.06■□□□□ 0.8
CMTM3-210ENST00000565666 SEPT5Q99719 369 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-210ENST00000565666 ACBD6Q9BR61 282 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 ABI2Q9NYB9 513 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-210ENST00000565666 SORCS3Q9UPU3 1222 aa20.06■□□□□ 0.8
CMTM3-210ENST00000565666 DOCK6Q96HP0 2047 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 FAM86C2PA6NEL3 165 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 BIN1O00499 593 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 IKBKBO14920 756 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 C4BPAP04003 597 aaKnown RBP20.05■□□□□ 0.8
CMTM3-210ENST00000565666 EPB41P11171 864 aaKnown RBP20.05■□□□□ 0.8
CMTM3-210ENST00000565666 LAMP2P13473 410 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 PPP1R2P41236 205 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 TUFMP49411 452 aaKnown RBP20.05■□□□□ 0.8
CMTM3-210ENST00000565666 ZXDAP98168 799 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 MTMR3Q13615 1198 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 NCOA4Q13772 614 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 CAMK4Q16566 473 aa20.05■□□□□ 0.8
CMTM3-210ENST00000565666 NFE2Q16621 373 aaPredicted RBP20.05■□□□□ 0.8
CMTM3-210ENST00000565666 ZNF699Q32M78 642 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms