RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 UPP1Q16831 310 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 CTXN3Q4LDR2 81 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 Q6ZUG5 572 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 C4orf19Q8IY42 314 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 RPLP0P6Q8NHW5 317 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 ASAP3Q8TDY4 903 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 TBCKQ8TEA7 893 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 LXNQ9BS40 222 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 POLR3BQ9NW08 1133 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-215ENST00000565559 FBXL5Q9UKA1 691 aa12.21□□□□□ -0.45
CAPN3-215ENST00000565559 VWA8A3KMH1 1905 aa12.21□□□□□ -0.46
CAPN3-215ENST00000565559 APC2O95996 2303 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 CYSRT1A8MQ03 144 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 EML1O00423 815 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 OPHN1O60890 802 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 TDP2O95551 362 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 CPB1P15086 417 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 EPHB3P54753 998 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 MAPK6Q16659 721 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 STXBP5Q5T5C0 1151 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 ZNF280DQ6N043 979 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 CCNI2Q6ZMN8 369 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-215ENST00000565559 LPCAT2Q7L5N7 544 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 SYT12Q8IV01 421 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 ETNPPLQ8TBG4 499 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 MDM1Q8TC05 714 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 BRF1Q92994 677 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 CCDC43Q96MW1 224 aaKnown RBP12.2□□□□□ -0.46
CAPN3-215ENST00000565559 LRRC3BQ96PB8 259 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 GTPBP2Q9BX10 602 aaKnown RBP12.2□□□□□ -0.46
CAPN3-215ENST00000565559 TPSD1Q9BZJ3 242 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 ATXN3LQ9H3M9 355 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 ZSWIM4Q9H7M6 989 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 XPNPEP1Q9NQW7 623 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 BRPF3Q9ULD4 1205 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-215ENST00000565559 SLC27A5Q9Y2P5 690 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 YIPF1Q9Y548 306 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 PCDHB9Q9Y5E1 797 aa12.2□□□□□ -0.46
CAPN3-215ENST00000565559 ASCC3Q8N3C0 2202 aaKnown RBP12.19□□□□□ -0.46
CAPN3-215ENST00000565559 CYP3A7-CYP3A51PA0A087WV96 503 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 KLF18A0A0U1RQI7 1052 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 TNFRSF10BO14763 440 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 EDIL3O43854 480 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 DGAT1O75907 488 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 CYP3A7P24462 503 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 CDC27P30260 824 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 PSMD2Q13200 908 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 PPP2R5CQ13362 524 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 RUNX3Q13761 415 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 GLRA4Q5JXX5 417 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 GPR158Q5T848 1215 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 LMBRD2Q68DH5 695 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-215ENST00000565559 ZBTB8OSQ8IWT0 167 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 ADAMTS14Q8WXS8 1223 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 P2RY13Q9BPV8 354 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 PDZD7Q9H5P4 517 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 UPF2Q9HAU5 1272 aaKnown RBP12.19□□□□□ -0.46
CAPN3-215ENST00000565559 PDRG1Q9NUG6 133 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 WRAP73Q9P2S5 460 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-215ENST00000565559 DDX25Q9UHL0 483 aaKnown RBP12.19□□□□□ -0.46
CAPN3-215ENST00000565559 GDAQ9Y2T3 454 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 NUB1Q9Y5A7 615 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 RAI2Q9Y5P3 530 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 UNC79Q9P2D8 2635 aa12.19□□□□□ -0.46
CAPN3-215ENST00000565559 LRRIQ4A6NIV6 560 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 CFIP05156 583 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 BCKDHBP21953 392 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 GLRA2P23416 452 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 IGFBP6P24592 240 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-215ENST00000565559 WEE1P30291 646 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 ARL2P36404 184 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 ALDH1A3P47895 512 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 FAM193AP78312 1265 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 CYP4A11Q02928 519 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 GFPT1Q06210 699 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-215ENST00000565559 PRPF4BQ13523 1007 aaKnown RBP12.18□□□□□ -0.46
CAPN3-215ENST00000565559 TOB2Q14106 344 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-215ENST00000565559 TRIP6Q15654 476 aaKnown RBP12.18□□□□□ -0.46
CAPN3-215ENST00000565559 LARP1BQ659C4 914 aaKnown RBP12.18□□□□□ -0.46
CAPN3-215ENST00000565559 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 MOXD1Q6UVY6 613 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 CD300LGQ6UXG3 332 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 TMC8Q8IU68 726 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 NOSTRINQ8IVI9 506 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 C3orf58Q8NDZ4 430 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 APPL2Q8NEU8 664 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 ZNF274Q96GC6 653 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-215ENST00000565559 SPACA7Q96KW9 195 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 PPP1R10Q96QC0 940 aaKnown RBP12.18□□□□□ -0.46
CAPN3-215ENST00000565559 CXCL16Q9H2A7 254 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 GKN1Q9NS71 199 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 SLC38A7Q9NVC3 462 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 ZNF462Q96JM2 2506 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 ASXL3Q9C0F0 2248 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 TENM4Q6N022 2769 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 NID2Q14112 1375 aa12.18□□□□□ -0.46
CAPN3-215ENST00000565559 PCNX2A6NKB5 2137 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms