RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ACCSQ96QU6 501 aa25.67■■□□□ 1.7
RAB40C-209ENST00000565511 CBWD1Q9BRT8 395 aa25.67■■□□□ 1.7
RAB40C-209ENST00000565511 TRPV4Q9HBA0 871 aa25.67■■□□□ 1.7
RAB40C-209ENST00000565511 OLFML3Q9NRN5 406 aa25.67■■□□□ 1.7
RAB40C-209ENST00000565511 OBSL1O75147 1896 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 GOLGA8IPA6NC78 632 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 GOLGA8JA6NMD2 632 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 ATF6P18850 670 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 BRSK2Q8IWQ3 736 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 LINC00301Q8NCQ3 95 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 OSBPL6Q9BZF3 934 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 BRD9Q9H8M2 597 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 DENND4CQ5VZ89 1909 aa25.66■■□□□ 1.7
RAB40C-209ENST00000565511 ARNTLO00327 626 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 PRPF6O94906 941 aaKnown RBP25.65■■□□□ 1.7
RAB40C-209ENST00000565511 GDI1P31150 447 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 EPHB3P54753 998 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 PLD1Q13393 1074 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 E2F4Q16254 413 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 DNAJB7Q7Z6W7 309 aaPredicted RBP25.65■■□□□ 1.7
RAB40C-209ENST00000565511 CXorf38Q8TB03 319 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 CLDN23Q96B33 292 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 LRRC3BQ96PB8 259 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 TRMT61BQ9BVS5 477 aaKnown RBP25.65■■□□□ 1.7
RAB40C-209ENST00000565511 BCO2Q9BYV7 579 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 PANK4Q9NVE7 773 aa25.65■■□□□ 1.7
RAB40C-209ENST00000565511 SPATA6Q9NWH7 488 aaPredicted RBP25.65■■□□□ 1.7
RAB40C-209ENST00000565511 TFIP11Q9UBB9 837 aaKnown RBP25.65■■□□□ 1.7
RAB40C-209ENST00000565511 KIF26AQ9ULI4 1882 aaPredicted RBP25.64■■□□□ 1.7
RAB40C-209ENST00000565511 HEPACAM2A8MVW5 462 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 PSMC3P17980 439 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 ALDH1A3P47895 512 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 POU5F1Q01860 360 aaKnown RBP25.64■■□□□ 1.7
RAB40C-209ENST00000565511 FOXD4L5Q5VV16 416 aaPredicted RBP25.64■■□□□ 1.7
RAB40C-209ENST00000565511 ARMCX5Q6P1M9 558 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 C1orf127Q8N9H9 656 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 FOXD4L4Q8WXT5 416 aaPredicted RBP25.64■■□□□ 1.7
RAB40C-209ENST00000565511 PSMG2Q969U7 264 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 SEPT5Q99719 369 aaPredicted RBP25.64■■□□□ 1.7
RAB40C-209ENST00000565511 ZSCAN16Q9H4T2 348 aaPredicted RBP25.64■■□□□ 1.7
RAB40C-209ENST00000565511 PCIF1Q9H4Z3 704 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 SLITRK6Q9H5Y7 841 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 TMLHEQ9NVH6 421 aa25.64■■□□□ 1.7
RAB40C-209ENST00000565511 IL18RAPO95256 599 aa25.63■■□□□ 1.69
RAB40C-209ENST00000565511 POLR2BP30876 1174 aaKnown RBP25.63■■□□□ 1.69
RAB40C-209ENST00000565511 TFAMQ00059 246 aaKnown RBP25.63■■□□□ 1.69
RAB40C-209ENST00000565511 POSTNQ15063 836 aa25.63■■□□□ 1.69
RAB40C-209ENST00000565511 STK38Q15208 465 aa25.63■■□□□ 1.69
RAB40C-209ENST00000565511 CCDC142Q17RM4 750 aa25.63■■□□□ 1.69
RAB40C-209ENST00000565511 STKLD1Q8NE28 680 aa25.63■■□□□ 1.69
RAB40C-209ENST00000565511 IL21Q9HBE4 155 aa25.63■■□□□ 1.69
RAB40C-209ENST00000565511 NDRG2Q9UN36 371 aaKnown RBP25.63■■□□□ 1.69
RAB40C-209ENST00000565511 EXOC7Q9UPT5 735 aa25.63■■□□□ 1.69
RAB40C-209ENST00000565511 PTPRJQ12913 1337 aa25.63■■□□□ 1.69
RAB40C-209ENST00000565511 PAX3P23760 479 aa25.62■■□□□ 1.69
RAB40C-209ENST00000565511 HOXD13P35453 343 aa25.62■■□□□ 1.69
RAB40C-209ENST00000565511 CYP4F8P98187 520 aa25.62■■□□□ 1.69
RAB40C-209ENST00000565511 ZNF852Q6ZMS4 543 aa25.62■■□□□ 1.69
RAB40C-209ENST00000565511 MFSD6LQ8IWD5 586 aa25.62■■□□□ 1.69
RAB40C-209ENST00000565511 RBAKQ9NYW8 714 aaPredicted RBP25.62■■□□□ 1.69
RAB40C-209ENST00000565511 DSEQ9UL01 958 aa25.62■■□□□ 1.69
RAB40C-209ENST00000565511 L1RE1Q9UN81 338 aa25.62■■□□□ 1.69
RAB40C-209ENST00000565511 KPNA7A9QM74 516 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 TULP1O00294 542 aaPredicted RBP25.61■■□□□ 1.69
RAB40C-209ENST00000565511 HCRTO43612 131 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 PRAMEF12O95522 483 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 ITGB3P05106 788 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 GARTP22102 1010 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 GABRR2P28476 465 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 GPR15P49685 360 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 LMBRD2Q68DH5 695 aaPredicted RBP25.61■■□□□ 1.69
RAB40C-209ENST00000565511 TSSK4Q6SA08 328 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 GIPC2Q8TF65 315 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 DEPDC1BQ8WUY9 529 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 PDE11AQ9HCR9 933 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 SIX4Q9UIU6 781 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 AGAP1Q9UPQ3 857 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 ASB3Q9Y575 518 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 PCDHB13Q9Y5F0 798 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 PIAS3Q9Y6X2 628 aa25.61■■□□□ 1.69
RAB40C-209ENST00000565511 SPTLC2O15270 562 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 LAMTOR5O43504 91 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 LMNAP02545 664 aaKnown RBP25.6■■□□□ 1.69
RAB40C-209ENST00000565511 SOX9P48436 509 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 CSTF1Q05048 431 aaKnown RBP25.6■■□□□ 1.69
RAB40C-209ENST00000565511 MGAT5BQ3V5L5 792 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 SV2CQ496J9 727 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 WDR44Q5JSH3 913 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 SHC4Q6S5L8 630 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 OSTM1Q86WC4 334 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 METTL23Q86XA0 190 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 NT5DC4Q86YG4 428 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 ARID3BQ8IVW6 561 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-209ENST00000565511 SYCP3Q8IZU3 236 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 PDCL2Q8N4E4 241 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 KCNG4Q8TDN1 519 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 NOC3LQ8WTT2 800 aaKnown RBP25.6■■□□□ 1.69
RAB40C-209ENST00000565511 IRF7Q92985 503 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 ATXN3LQ9H3M9 355 aa25.6■■□□□ 1.69
RAB40C-209ENST00000565511 ABI2Q9NYB9 513 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms