RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GOLGA2P5Q9HBQ8 144 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 POLMQ9NP87 494 aaPredicted RBP9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 HPS4Q9NQG7 708 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 TOPORSQ9NS56 1045 aaPredicted RBP9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 KIAA1522Q9P206 1035 aaPredicted RBP9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 VAV3Q9UKW4 847 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 UNC79Q9P2D8 2635 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 TDRD15B5MCY1 1934 aaKnown RBP9.9□□□□□ -0.83
VPS9D1-205ENST00000565452 ABCA7Q8IZY2 2146 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 APC2O95996 2303 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 OTOL1A6NHN0 477 aaPredicted RBP9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 BAG4O95429 457 aaKnown RBP9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 PRAMEF12O95522 483 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 XRCC6P12956 609 aaKnown RBP eCLIP9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 CDC25CP30307 473 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 GJA4P35212 333 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 AVPR1AP37288 418 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 PTGER3P43115 390 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 CYP4F3Q08477 520 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 BFSP1Q12934 665 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 NR1H3Q13133 447 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 KRT32Q14532 448 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 TAF12Q16514 161 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 LYSMD4Q5XG99 296 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 TRIM68Q6AZZ1 485 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 NCAPH2Q6IBW4 605 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 ARMCX6Q7L4S7 300 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 CMTM8Q8IZV2 173 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 ZNF843Q8N446 348 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 MINDY1Q8N5J2 469 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 DAGLBQ8NCG7 672 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 OLIG1Q8TAK6 271 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 DDX12PQ92771 950 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 SLC46A2Q9BY10 475 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 DNAJC25Q9H1X3 360 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 DNAAF2Q9NVR5 837 aaKnown RBP9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 VPS54Q9P1Q0 977 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 TBX20Q9UMR3 447 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 PCDHA4Q9UN74 947 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 SLC27A5Q9Y2P5 690 aa9.89□□□□□ -0.83
VPS9D1-205ENST00000565452 KALRNO60229 2985 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 COL4A2P08572 1712 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 TRABD2BA6NFA1 517 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 TTLL13PA6NNM8 815 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 ARHGAP6O43182 974 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 OAZ2O95190 189 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 LYPLA2O95372 231 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 LIG1P18858 919 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 ITPKAP23677 461 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 MCM4P33991 863 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 P2RY2P41231 377 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 ABCG1P45844 678 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 TUFMP49411 452 aaKnown RBP9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 KCNC4Q03721 635 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 YWHAHQ04917 246 aaPredicted RBP9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 GPR17Q13304 367 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 NBR1Q14596 966 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 C2orf27AQ580R0 203 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 PEAR1Q5VY43 1037 aaPredicted RBP9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 CDCA2Q69YH5 1023 aaPredicted RBP9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 CENPPQ6IPU0 288 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 ALKAL1Q6UXT8 129 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 MAEAQ7L5Y9 396 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 TMPRSS7Q7RTY8 843 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 USP37Q86T82 979 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 BLIDQ8IZY5 108 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 CPA6Q8N4T0 437 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 KCNB2Q92953 911 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 CAMK1GQ96NX5 476 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 PGLYRP2Q96PD5 576 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 NACC1Q96RE7 527 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 FNBP1Q96RU3 617 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 CCDC94Q9BW85 323 aaPredicted RBP9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 RNF26Q9BY78 433 aaPredicted RBP9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 SMG9Q9H0W8 520 aaKnown RBP9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 ECT2Q9H8V3 914 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 KCNMB3Q9NPA1 279 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 TDP1Q9NUW8 608 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 PCDHB8Q9UN66 801 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 WDR81Q562E7 1941 aa9.88□□□□□ -0.83
VPS9D1-205ENST00000565452 MYO18BQ8IUG5 2567 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 OR6C75A6NL08 312 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 AP5Z1O43299 807 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 SLC37A4O43826 429 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 HMGB1P09429 215 aaKnown RBP9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 ARSAP15289 507 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 GCFC2P16383 781 aaKnown RBP9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 DDX6P26196 483 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 U2AF2P26368 475 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 HSPA4P34932 840 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 CYP4F8P98187 520 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 SOX4Q06945 474 aaPredicted RBP9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 VEPH1Q14D04 833 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 CRY1Q16526 586 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 XKR4Q5GH76 650 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 EEF1DP3Q658K8 133 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 GALNT17Q6IS24 598 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 ARMCX5Q6P1M9 558 aa9.87□□□□□ -0.83
VPS9D1-205ENST00000565452 GLRX5Q86SX6 157 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms