RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ARID3BQ8IVW6 561 aaPredicted RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 MFSD6LQ8IWD5 586 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 DCP1BQ8IZD4 617 aaKnown RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 RDH13Q8NBN7 331 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 LINC00301Q8NCQ3 95 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 OR10T2Q8NGX3 314 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 TTC8Q8TAM2 541 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 SHKBP1Q8TBC3 707 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 ATRIPQ8WXE1 791 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 FAM3CQ92520 227 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 E2F7Q96AV8 911 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 DHX58Q96C10 678 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 DDX23Q9BUQ8 820 aaKnown RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 OSBPL6Q9BZF3 934 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 ZCWPW1Q9H0M4 648 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 CRISPLD1Q9H336 500 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 SEMA4AQ9H3S1 761 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 LMAN1LQ9HAT1 526 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 ZNF334Q9HCZ1 680 aaPredicted RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 LTB4R2Q9NPC1 389 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 THG1LQ9NWX6 298 aaKnown RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 ABI2Q9NYB9 513 aaPredicted RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 RBAKQ9NYW8 714 aaPredicted RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 A0A087X0B3 334 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 CUTAO60888 179 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 PPP6R2O75170 966 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 TNNC2P02585 160 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 ITGB3P05106 788 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 TMEM191BP0C7N4 346 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 HAPLN1P10915 354 aaPredicted RBP6.91□□□□□ -1.3
TCF4-228ENST00000565393 PDIA4P13667 645 aaKnown RBP6.91□□□□□ -1.3
TCF4-228ENST00000565393 FCARP24071 287 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 CCNE1P24864 410 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 TARSP26639 723 aaKnown RBP6.91□□□□□ -1.3
TCF4-228ENST00000565393 POLR2BP30876 1174 aaKnown RBP6.91□□□□□ -1.3
TCF4-228ENST00000565393 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
TCF4-228ENST00000565393 EPHA5P54756 1037 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 MYO1EQ12965 1108 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 STXBP5Q5T5C0 1151 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 HSCBQ8IWL3 235 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 EFCAB13Q8IY85 973 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 GPD1LQ8N335 351 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 TTC9BQ8N6N2 239 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 IQUBQ8NA54 791 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 TTC16Q8NEE8 873 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 ZSWIM2Q8NEG5 633 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 SPPL2BQ8TCT7 592 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 DEPDC1BQ8WUY9 529 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 DNASE1L2Q92874 299 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 HPS3Q969F9 1004 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 PSMG2Q969U7 264 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 BORCS6Q96GS4 357 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 ANKRD36BP1Q96IX9 119 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 ZNF560Q96MR9 790 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 GCNAQ96QF7 691 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 LPIN3Q9BQK8 851 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 CBWD1Q9BRT8 395 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 PI4K2AQ9BTU6 479 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 STRA6Q9BX79 667 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 TRPV4Q9HBA0 871 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 PDE11AQ9HCR9 933 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 OLFML3Q9NRN5 406 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 DDX43Q9NXZ2 648 aaKnown RBP6.91□□□□□ -1.3
TCF4-228ENST00000565393 FAM13BQ9NYF5 915 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 HSFX1Q9UBD0 423 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 GTF3C4Q9UKN8 822 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 MAGED2Q9UNF1 606 aaPredicted RBP6.91□□□□□ -1.3
TCF4-228ENST00000565393 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 SNX9Q9Y5X1 595 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 WDR81Q562E7 1941 aa6.91□□□□□ -1.3
TCF4-228ENST00000565393 ARID2Q68CP9 1835 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 BDP1A6H8Y1 2624 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 KIAA0391O15091 583 aaKnown RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 CHADO15335 359 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 POLR2DO15514 142 aaKnown RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 KINO60870 393 aaKnown RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 PPP1R37O75864 691 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 PDGFRBP09619 1106 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 TNNI1P19237 187 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 ACAT1P24752 427 aaKnown RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 CDC25CP30307 473 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 MAGEA9P43362 315 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 AFMP43652 599 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 ME1P48163 572 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 WNT7BP56706 349 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 RPL10AP62906 217 aaKnown RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 ASIC1P78348 528 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 CYP4F8P98187 520 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 MYL7Q01449 175 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 TSPY1Q01534 308 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 PPP2R5DQ14738 602 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 SURF1Q15526 300 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 NFE2Q16621 373 aaPredicted RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 DDR2Q16832 855 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 DUOXA2Q1HG44 320 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 SDHAF4Q5VUM1 108 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 LMBRD2Q68DH5 695 aaPredicted RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 SHC4Q6S5L8 630 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms