RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 C15orf52Q6ZUT6 534 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CCDC84Q86UT8 332 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 HOOK3Q86VS8 718 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TMTC1Q8IUR5 882 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 GRAMD2AQ8IUY3 354 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CNGA4Q8IV77 575 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TMCO5AQ8N6Q1 288 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 OR52K2Q8NGK3 314 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CTCFLQ8NI51 663 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CCHCR1Q8TD31 782 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ASAP3Q8TDY4 903 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CLP1Q92989 425 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 IQCDQ96DY2 449 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CHFRQ96EP1 664 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CNDP2Q96KP4 475 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 DEPDC7Q96QD5 511 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 PNKPQ96T60 521 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 OSMRQ99650 979 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 NAPGQ99747 312 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ELAC2Q9BQ52 826 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 PI4K2AQ9BTU6 479 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 SARGQ9BW04 601 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 FAM107BQ9H098 131 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 NSRP1Q9H0G5 558 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CUEDC2Q9H467 287 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 SMARCAD1Q9H4L7 1026 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TUT1Q9H6E5 874 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 DNAJC18Q9H819 358 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 MAGEF1Q9HAY2 307 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CYP4F12Q9HCS2 524 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CABP5Q9NP86 173 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 LUC7LQ9NQ29 371 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TBC1D22BQ9NU19 505 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 RMND1Q9NWS8 449 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 PPP1R14DQ9NXH3 145 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 BTG4Q9NY30 223 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 LRP2BPQ9P2M1 347 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 STRIP2Q9ULQ0 834 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 KCNJ14Q9UNX9 436 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 COG5Q9UP83 839 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ATP11BQ9Y2G3 1177 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ANGPTL3Q9Y5C1 460 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 LAMB2P55268 1798 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ARID1BQ8NFD5 2236 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 AHDC1Q5TGY3 1603 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 A0A087X0B3 334 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CTAGE15A4D2H0 777 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CTAGE9A4FU28 777 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 H0Y626 953 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 MASP2O00187 686 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 FOXN1O15353 648 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CYP26A1O43174 497 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CEP104O60308 925 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 DLGAP3O95886 979 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CD4P01730 458 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 MT-ND3P03897 115 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CTAGE8P0CG41 777 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ATP6V1B1P15313 513 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 RXRAP19793 462 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 XPAP23025 273 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 PMLP29590 882 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CRKLP46109 303 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 NOVP48745 357 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 GNAQP50148 359 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 SLC12A2P55011 1212 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ADKP55263 362 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ZNF280AP59817 542 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 VSNL1P62760 191 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CDK17Q00537 523 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 AMPD2Q01433 879 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 PICALMQ13492 652 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 SNX1Q13596 522 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 MTF1Q14872 753 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 MSMPQ1L6U9 139 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 C15orf59Q2T9L4 293 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 TTC38Q5R3I4 469 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 IFIT1BQ5T764 474 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ZNF658Q5TYW1 1059 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 MEX3CQ5U5Q3 659 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CDPF1Q6NVV7 123 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 TLDC1Q6P9B6 456 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CORO6Q6QEF8 472 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 BNC2Q6ZN30 1099 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 MICALCLQ6ZW33 695 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 TMC4Q7Z404 712 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CTAGE6Q86UF2 777 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ZSCAN29Q8IWY8 852 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CTAGE4Q8IX94 777 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CCDC13Q8IYE1 715 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 NRSN1Q8IZ57 195 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 LSMEM2Q8N112 164 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 SLC35F6Q8N357 371 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 IL17RDQ8NFM7 739 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 B4GALNT2Q8NHY0 566 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 MDM1Q8TC05 714 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ZNF384Q8TF68 577 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 NOC3LQ8WTT2 800 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 BSNDQ8WZ55 320 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CDKL2Q92772 493 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 NXPE3Q969Y0 559 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms