RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PIAS3Q9Y6X2 628 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 TICRRQ7Z2Z1 1910 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 LAMA1P25391 3075 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 CEP250Q9BV73 2442 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ANK1P16157 1881 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 MYMKA6NI61 221 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 CYB561D2O14569 222 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 KRT18P05783 430 aaKnown RBP9.29□□□□□ -0.92
CAPN3-213ENST00000565173 ATF6P18850 670 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 CCNE1P24864 410 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 WEE1P30291 646 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 ABCD1P33897 745 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 CDR1P51861 262 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 POU5F1Q01860 360 aaKnown RBP9.29□□□□□ -0.92
CAPN3-213ENST00000565173 KCNA1Q09470 495 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 CUL4AQ13619 759 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 TMEM132DQ14C87 1099 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 SLC39A12Q504Y0 691 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 SCARA3Q6AZY7 606 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 ADALQ6DHV7 355 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 SLFN12LQ6IEE8 588 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 EFCAB13Q8IY85 973 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 E2F7Q96AV8 911 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 DNAJC19Q96DA6 116 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 HINFPQ9BQA5 517 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 FAM126AQ9BYI3 521 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-213ENST00000565173 SLITRK6Q9H5Y7 841 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 FBXO2Q9UK22 296 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-213ENST00000565173 AGO2Q9UKV8 859 aaKnown RBP9.29□□□□□ -0.92
CAPN3-213ENST00000565173 CLIC4Q9Y696 253 aa9.29□□□□□ -0.92
CAPN3-213ENST00000565173 TSC2P49815 1807 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 SCN1AP35498 2009 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 MED19A0JLT2 244 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-213ENST00000565173 MYBPHLA2RUH7 354 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 SLC38A8A6NNN8 435 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 TBCAO75347 108 aaKnown RBP9.28□□□□□ -0.92
CAPN3-213ENST00000565173 GABRR2P28476 465 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 SOX9P48436 509 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 TUFMP49411 452 aaKnown RBP9.28□□□□□ -0.92
CAPN3-213ENST00000565173 WNT7BP56706 349 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 SATB1Q01826 763 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 PUM1Q14671 1186 aaKnown RBP eCLIP9.28□□□□□ -0.92
CAPN3-213ENST00000565173 WSCD1Q658N2 575 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 ARMCX5Q6P1M9 558 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 TXNDC11Q6PKC3 985 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 TMEM150AQ86TG1 271 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 SFR1Q86XK3 245 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 KRI1Q8N9T8 703 aaKnown RBP9.28□□□□□ -0.92
CAPN3-213ENST00000565173 ZSWIM2Q8NEG5 633 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 CXorf38Q8TB03 319 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 ZFYVE19Q96K21 471 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 CLIC6Q96NY7 704 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 LPIN3Q9BQK8 851 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 IER2Q9BTL4 223 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 SLC46A2Q9BY10 475 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 ATXN3LQ9H3M9 355 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 TASP1Q9H6P5 420 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 DPP3Q9NY33 737 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 DSEQ9UL01 958 aa9.28□□□□□ -0.92
CAPN3-213ENST00000565173 SMG5Q9UPR3 1016 aaKnown RBP9.28□□□□□ -0.92
CAPN3-213ENST00000565173 SRPRBQ9Y5M8 271 aaKnown RBP9.28□□□□□ -0.92
CAPN3-213ENST00000565173 KPNA7A9QM74 516 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 SPECC1L-ADORA2AF8WAN1 911 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 PRAMEF12O95522 483 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 FGF19O95750 216 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 HMGA1P17096 107 aaKnown RBP9.27□□□□□ -0.93
CAPN3-213ENST00000565173 TAF6P49848 677 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 NRLP54845 237 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 DMWDQ09019 674 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 RSPO4Q2I0M5 234 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-213ENST00000565173 GPR158Q5T848 1215 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 DGLUCYQ7Z3D6 616 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 ITIH5Q86UX2 942 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 RASSF8Q8NHQ8 419 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 CSGALNACT1Q8TDX6 532 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 POMGNT1Q8WZA1 660 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 HVCN1Q96D96 273 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 MSANTD3Q96H12 275 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-213ENST00000565173 PYM1Q9BRP8 204 aaKnown RBP9.27□□□□□ -0.93
CAPN3-213ENST00000565173 C8orf33Q9H7E9 229 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-213ENST00000565173 RBM12Q9NTZ6 932 aaKnown RBP9.27□□□□□ -0.93
CAPN3-213ENST00000565173 TMLHEQ9NVH6 421 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 C2orf42Q9NWW7 574 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 OBP2AQ9NY56 170 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 GTSE1Q9NYZ3 720 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 NCDNQ9UBB6 729 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 SEL1LQ9UBV2 794 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 STK17AQ9UEE5 414 aa9.27□□□□□ -0.93
CAPN3-213ENST00000565173 A0A087X0B3 334 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 FRMD3A2A2Y4 597 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 VPS37CA5D8V6 355 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 K7ESF4 209 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 HRO43593 1189 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 IL18RAPO95256 599 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 PAPSS2O95340 614 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 F11P03951 625 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms