RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 NPAS4Q8IUM7 802 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 TMEM192Q8IY95 271 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 DDX1Q92499 740 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 VWCEQ96DN2 955 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 ARHGEF26Q96DR7 871 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 PCDHB18PQ96TA0 734 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 ARID3AQ99856 593 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 PI4K2AQ9BTU6 479 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 RSAD1Q9HA92 442 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 ABCB6Q9NP58 842 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 OSGEPQ9NPF4 335 aa13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 PACSIN2Q9UNF0 486 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 PDCD11Q14690 1871 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-208ENST00000565070 TRIP11Q15643 1979 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 TULP1O00294 542 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 XPOTO43592 962 aaKnown RBP13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 FTLP02792 175 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 ABCB4P21439 1286 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 PDE6CP51160 858 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 LONRF2Q1L5Z9 754 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 SLC10A6Q3KNW5 377 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 WDR44Q5JSH3 913 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 GLB1LQ6UWU2 654 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 NT5DC3Q86UY8 548 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 WDR49Q8IV35 697 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 RHOT2Q8IXI1 618 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 RNF169Q8NCN4 708 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 UBE2Q2Q8WVN8 375 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 RUBCNQ92622 972 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 MS4A14Q96JA4 679 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 PBKQ96KB5 322 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 RPS6KC1Q96S38 1066 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 GOLPH3Q9H4A6 298 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 EHD2Q9NZN4 543 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 CNTN3Q9P232 1028 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 C2CD2Q9Y426 696 aa13.51□□□□□ -0.25
NSMCE1-208ENST00000565070 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 LACTBL1A8MY62 500 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 BUB1BO60566 1050 aaPredicted RBP13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 KCNE1P15382 129 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ATF7P17544 494 aaPredicted RBP13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 AKAP5P24588 427 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 BIRC3Q13489 604 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 TCTN1Q2MV58 587 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 XKR4Q5GH76 650 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ALKAL1Q6UXT8 129 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 DAAM2Q86T65 1068 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 TAF4BQ92750 862 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 HES6Q96HZ4 224 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 FUT8Q9BYC5 575 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ACP6Q9NPH0 428 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 SMARCAL1Q9NZC9 954 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 INPPL1O15357 1258 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 MTA2O94776 668 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 MMEP08473 750 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ACRP10323 421 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ACO1P21399 889 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 GPC5P78333 572 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 DUOXA2Q1HG44 320 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 CCDC70Q6NSX1 233 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 AGMOQ6ZNB7 445 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ZNF365Q70YC5 407 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 OR5B17Q8NGF7 314 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 URGCPQ8TCY9 931 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ELMO3Q96BJ8 720 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 ANKRD36BP1Q96IX9 119 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 RNF39Q9H2S5 420 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 KANSL3Q9P2N6 904 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 COG5Q9UP83 839 aa13.5□□□□□ -0.25
NSMCE1-208ENST00000565070 TDRD15B5MCY1 1934 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 ARL5CA6NH57 179 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 KCNK3O14649 394 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 SASH3O75995 380 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 TNNC2P02585 160 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 TMEM191BP0C7N4 346 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 WDR5P61964 334 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 CUL2Q13617 745 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 GLE1Q53GS7 698 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 TAF3Q5VWG9 929 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 ZNF677Q86XU0 584 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 ACTRT1Q8TDG2 376 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 HERVK_113Q902F9 699 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 LPPQ93052 612 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 KIF12Q96FN5 646 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 APOBEC3GQ9HC16 384 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 RBM12Q9NTZ6 932 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 TMEM59LQ9UK28 342 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 L1RE1Q9UN81 338 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 CNTN6Q9UQ52 1028 aa13.49□□□□□ -0.25
NSMCE1-208ENST00000565070 MAP2K7O14733 419 aa13.48□□□□□ -0.25
NSMCE1-208ENST00000565070 KRT5P13647 590 aa13.48□□□□□ -0.25
NSMCE1-208ENST00000565070 IBSPP21815 317 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms