RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 ALG3Q92685 438 aa26.81■■□□□ 1.88
LINC01003-201ENST00000564834 BARX2Q9UMQ3 279 aaPredicted RBP26.81■■□□□ 1.88
LINC01003-201ENST00000564834 TLR3O15455 904 aaKnown RBP26.8■■□□□ 1.88
LINC01003-201ENST00000564834 XPOTO43592 962 aaKnown RBP26.8■■□□□ 1.88
LINC01003-201ENST00000564834 SPOPO43791 374 aa26.8■■□□□ 1.88
LINC01003-201ENST00000564834 ZRANB2O95218 330 aaKnown RBP eCLIP26.8■■□□□ 1.88
LINC01003-201ENST00000564834 KCNE1P15382 129 aa26.8■■□□□ 1.88
LINC01003-201ENST00000564834 PTPN11Q06124 597 aaPredicted RBP26.8■■□□□ 1.88
LINC01003-201ENST00000564834 C8orf74Q6P047 294 aa26.8■■□□□ 1.88
LINC01003-201ENST00000564834 SMG8Q8ND04 991 aaKnown RBP26.8■■□□□ 1.88
LINC01003-201ENST00000564834 TMEM176AQ96HP8 235 aa26.8■■□□□ 1.88
LINC01003-201ENST00000564834 LRRC1Q9BTT6 524 aa26.8■■□□□ 1.88
LINC01003-201ENST00000564834 LHX5Q9H2C1 402 aa26.8■■□□□ 1.88
LINC01003-201ENST00000564834 PARP2Q9UGN5 583 aa26.8■■□□□ 1.88
LINC01003-201ENST00000564834 HMGXB4Q9UGU5 601 aa26.8■■□□□ 1.88
LINC01003-201ENST00000564834 CCDC66A2RUB6 948 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 RPS6KA5O75582 802 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 CTNNA2P26232 953 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 CTNNA1P35221 906 aaKnown RBP26.79■■□□□ 1.88
LINC01003-201ENST00000564834 CLUL1Q15846 466 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 RNF180Q86T96 592 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 C18orf25Q96B23 403 aaPredicted RBP26.79■■□□□ 1.88
LINC01003-201ENST00000564834 TWNKQ96RR1 684 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 ELOVL4Q9GZR5 314 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 GRIN2DO15399 1336 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 SMIM28A0A1B0GU29 152 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 MYO1FO00160 1098 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 CD4P01730 458 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 CHRNA1P02708 482 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 MGAT3Q09327 533 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 MAMLD1Q13495 774 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 KRT35Q92764 455 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 RNPC3Q96LT9 517 aaKnown RBP26.79■■□□□ 1.88
LINC01003-201ENST00000564834 RNF39Q9H2S5 420 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 PARVAQ9NVD7 372 aa26.79■■□□□ 1.88
LINC01003-201ENST00000564834 CABYRO75952 493 aa26.78■■□□□ 1.88
LINC01003-201ENST00000564834 CTSHP09668 335 aa26.78■■□□□ 1.88
LINC01003-201ENST00000564834 ATF7P17544 494 aaPredicted RBP26.78■■□□□ 1.88
LINC01003-201ENST00000564834 SLC1A1P43005 524 aa26.78■■□□□ 1.88
LINC01003-201ENST00000564834 PEX5P50542 639 aa26.78■■□□□ 1.88
LINC01003-201ENST00000564834 PTGISQ16647 500 aa26.78■■□□□ 1.88
LINC01003-201ENST00000564834 C9orf57Q5W0N0 161 aa26.78■■□□□ 1.88
LINC01003-201ENST00000564834 LLGL2Q6P1M3 1020 aa26.78■■□□□ 1.88
LINC01003-201ENST00000564834 NAP1L3Q99457 506 aaPredicted RBP26.78■■□□□ 1.88
LINC01003-201ENST00000564834 ST3GAL5Q9UNP4 418 aa26.78■■□□□ 1.88
LINC01003-201ENST00000564834 CCDC188H7C350 402 aa26.77■■□□□ 1.88
LINC01003-201ENST00000564834 SEC31AO94979 1220 aaKnown RBP26.77■■□□□ 1.88
LINC01003-201ENST00000564834 WDTC1Q8N5D0 677 aa26.77■■□□□ 1.88
LINC01003-201ENST00000564834 CHST12Q9NRB3 414 aa26.77■■□□□ 1.88
LINC01003-201ENST00000564834 KLK14Q9P0G3 267 aa26.77■■□□□ 1.88
LINC01003-201ENST00000564834 PCDHA3Q9Y5H8 950 aa26.77■■□□□ 1.88
LINC01003-201ENST00000564834 PPEF2O14830 753 aa26.76■■□□□ 1.88
LINC01003-201ENST00000564834 FGGP02679 453 aa26.76■■□□□ 1.88
LINC01003-201ENST00000564834 VDRP11473 427 aa26.76■■□□□ 1.88
LINC01003-201ENST00000564834 MARCKSL1P49006 195 aa26.76■■□□□ 1.88
LINC01003-201ENST00000564834 NDST1P52848 882 aa26.76■■□□□ 1.88
LINC01003-201ENST00000564834 PHLDB2Q86SQ0 1253 aa26.76■■□□□ 1.88
LINC01003-201ENST00000564834 TRIM7Q9C029 511 aa26.76■■□□□ 1.88
LINC01003-201ENST00000564834 RRP9O43818 475 aaKnown RBP26.76■■□□□ 1.87
LINC01003-201ENST00000564834 CYP3A5P20815 502 aa26.76■■□□□ 1.87
LINC01003-201ENST00000564834 DENND1BQ6P3S1 775 aa26.76■■□□□ 1.87
LINC01003-201ENST00000564834 ERICH1Q86X53 443 aa26.76■■□□□ 1.87
LINC01003-201ENST00000564834 KRT12Q99456 494 aa26.76■■□□□ 1.87
LINC01003-201ENST00000564834 STIM2Q9P246 746 aa26.76■■□□□ 1.87
LINC01003-201ENST00000564834 SNX9Q9Y5X1 595 aa26.76■■□□□ 1.87
LINC01003-201ENST00000564834 FRMPD3Q5JV73 1810 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 KRIT1O00522 736 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 PIRO00625 290 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 ATP8B1O43520 1251 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 VEGFBP49765 207 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 ORC1Q13415 861 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 ITGA7Q13683 1181 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 LONRF2Q1L5Z9 754 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 BEND6Q5SZJ8 279 aaPredicted RBP26.75■■□□□ 1.87
LINC01003-201ENST00000564834 CPNE8Q86YQ8 564 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 HDAC7Q8WUI4 952 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 NT5C1AQ9BXI3 368 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 DMGDHQ9UI17 866 aaKnown RBP26.75■■□□□ 1.87
LINC01003-201ENST00000564834 KIAA1257Q9ULG3 409 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 STRIP2Q9ULQ0 834 aa26.75■■□□□ 1.87
LINC01003-201ENST00000564834 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.75■■□□□ 1.87
LINC01003-201ENST00000564834 GPR182O15218 404 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 PROSCO94903 275 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 THPOP40225 353 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 NFX1Q12986 1120 aaKnown RBP26.74■■□□□ 1.87
LINC01003-201ENST00000564834 SGO2Q562F6 1265 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 ARRDC4Q8NCT1 418 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 FEZF2Q8TBJ5 459 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 ZNF560Q96MR9 790 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 AP1M1Q9BXS5 423 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 TCRBV5S1A1TA0A578 114 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 PNPLA4P41247 253 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 ACLYP53396 1101 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 ZNF211Q13398 564 aaPredicted RBP26.74■■□□□ 1.87
LINC01003-201ENST00000564834 CNGA2Q16280 664 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 MAP9Q49MG5 647 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 FBXO47Q5MNV8 452 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 SEL1L2Q5TEA6 688 aa26.74■■□□□ 1.87
LINC01003-201ENST00000564834 HEXIM2Q96MH2 286 aaKnown RBP26.74■■□□□ 1.87
LINC01003-201ENST00000564834 FAM105AQ9NUU6 356 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms