RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 IQCEQ6IPM2 695 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 RNF19BQ6ZMZ0 732 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 DPH6Q7L8W6 267 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 TRAPPC11Q7Z392 1133 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 GRASPQ7Z6J2 395 aaPredicted RBP14.41□□□□□ -0.1
CLK3-216ENST00000564468 DCP1BQ8IZD4 617 aaKnown RBP14.41□□□□□ -0.1
CLK3-216ENST00000564468 SMARCE1Q969G3 411 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 NXPE3Q969Y0 559 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 CCDC127Q96BQ5 260 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 HSFX1Q9UBD0 423 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 SORCS3Q9UPU3 1222 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 INSL5Q9Y5Q6 135 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 ZFHX2Q9C0A1 2572 aaPredicted RBP14.41□□□□□ -0.1
CLK3-216ENST00000564468 TECTAO75443 2155 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 ZNF197O14709 1029 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 LHX1P48742 406 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 ZXDAP98168 799 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 FOXK2Q01167 660 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 MYL7Q01449 175 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 TSPY1Q01534 308 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 TRPC3Q13507 836 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 PNOCQ13519 176 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 MTMR3Q13615 1198 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 PABPC1LQ4VXU2 614 aaKnown RBP14.4□□□□□ -0.1
CLK3-216ENST00000564468 WSCD1Q658N2 575 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 LMBRD2Q68DH5 695 aaPredicted RBP14.4□□□□□ -0.1
CLK3-216ENST00000564468 GET4Q7L5D6 327 aaPredicted RBP14.4□□□□□ -0.1
CLK3-216ENST00000564468 UBALD2Q8IYN6 164 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 TOP6BLQ8N6T0 577 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 OR5B17Q8NGF7 314 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 CXorf38Q8TB03 319 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 C2orf15Q8WU43 125 aaKnown RBP14.4□□□□□ -0.1
CLK3-216ENST00000564468 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 ZNF512Q96ME7 567 aaPredicted RBP14.4□□□□□ -0.1
CLK3-216ENST00000564468 AVENQ9NQS1 362 aaPredicted RBP14.4□□□□□ -0.1
CLK3-216ENST00000564468 EPS15L1Q9UBC2 864 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 LIMD1Q9UGP4 676 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 SNX9Q9Y5X1 595 aa14.4□□□□□ -0.1
CLK3-216ENST00000564468 ZDBF2Q9HCK1 2354 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 MAPK13O15264 365 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 PHACTR2O75167 634 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 SEC24AO95486 1093 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 PPP1R2P41236 205 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 ALDH1A3P47895 512 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 TUFMP49411 452 aaKnown RBP14.39□□□□□ -0.11
CLK3-216ENST00000564468 EPHB3P54753 998 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 CYP4A22Q5TCH4 519 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 ZNF658Q5TYW1 1059 aaPredicted RBP14.39□□□□□ -0.11
CLK3-216ENST00000564468 CEP135Q66GS9 1140 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 FBXL6Q8N531 539 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 LEMD2Q8NC56 503 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 FEZF2Q8TBJ5 459 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 TMC2Q8TDI7 906 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 PARD3BQ8TEW8 1205 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 ZCWPW1Q9H0M4 648 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 DNMT3BQ9UBC3 853 aaKnown RBP14.39□□□□□ -0.11
CLK3-216ENST00000564468 MAPK8IP1Q9UQF2 711 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 PTPRJQ12913 1337 aa14.39□□□□□ -0.11
CLK3-216ENST00000564468 PTPRZ1P23471 2315 aaPredicted RBP14.38□□□□□ -0.11
CLK3-216ENST00000564468 ZNF638Q14966 1978 aaKnown RBP14.38□□□□□ -0.11
CLK3-216ENST00000564468 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 RHOP08100 348 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 FAM163BP0C2L3 166 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 OR4Q2P0C623 313 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 LAMP2P13473 410 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 NR2F2P24468 414 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 PCSK1P29120 753 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 ATICP31939 592 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 ENPEPQ07075 957 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 SIGLEC14Q08ET2 396 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 TWF1Q12792 350 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 DUSP4Q13115 394 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 STIM1Q13586 685 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 NFE2Q16621 373 aaPredicted RBP14.38□□□□□ -0.11
CLK3-216ENST00000564468 EDRF1Q3B7T1 1238 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 COBLL1Q53SF7 1204 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 IER5LQ5T953 404 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 CENPPQ6IPU0 288 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 ADGRF2Q8IZF7 708 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 PRSS33Q8NF86 280 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 SPATA20Q8TB22 786 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 SPPL2BQ8TCT7 592 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
CLK3-216ENST00000564468 PGLYRP2Q96PD5 576 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 MYADMQ96S97 322 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 CDH7Q9ULB5 785 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 L1RE1Q9UN81 338 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 MRPS23Q9Y3D9 190 aaKnown RBP14.38□□□□□ -0.11
CLK3-216ENST00000564468 YIPF1Q9Y548 306 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 ASB3Q9Y575 518 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 PCDHA5Q9Y5H7 936 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 MYH10P35580 1976 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 CACNA1HO95180 2353 aa14.38□□□□□ -0.11
CLK3-216ENST00000564468 DENND4CQ5VZ89 1909 aa14.37□□□□□ -0.11
CLK3-216ENST00000564468 IKBKBO14920 756 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms