RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TAS1R2Q8TE23 839 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 OPTNQ96CV9 577 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 SLC4A9Q96Q91 983 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 RBAKQ9NYW8 714 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-209ENST00000564068 DGKIO75912 1065 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 SNRPAP09012 282 aaKnown RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 MCF2P10911 925 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 GSTT1P30711 240 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 CASP2P42575 452 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 CRKP46108 304 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 BNIP1Q12981 228 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 SPDYCQ5MJ68 293 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 WLSQ5T9L3 541 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 CC2D2BQ6DHV5 1058 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 TRIM72Q6ZMU5 477 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 HDAC11Q96DB2 347 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 CCDC138Q96M89 665 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 DCLK3Q9C098 648 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 EME2A4GXA9 379 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 KCNN4O15554 427 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 MED7O43513 233 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 TFDP1Q14186 410 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 DALRD3Q5D0E6 543 aaKnown RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 SPATA18Q8TC71 538 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 HAS1Q92839 578 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 ANKRD36BP1Q96IX9 119 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 CNBD2Q96M20 576 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 RMDN3Q96TC7 470 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 ZNF184Q99676 751 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 TOPORSQ9NS56 1045 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 GABBR1Q9UBS5 961 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 PCDHA3Q9Y5H8 950 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 CALCAP01258 141 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 EME1Q96AY2 570 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 THAP11Q96EK4 314 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 CCDC97Q96F63 343 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 UPF3AQ9H1J1 476 aaKnown RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 DDX56Q9NY93 547 aaKnown RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 AGO2Q9UKV8 859 aaKnown RBP13.22□□□□□ -0.29
COMMD4-209ENST00000564068 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
COMMD4-209ENST00000564068 PYGBP11216 843 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 ETS2P15036 469 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 IGBP1P78318 339 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 PPATQ06203 517 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 ECHDC2Q86YB7 292 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 MPHOSPH6Q99547 160 aaKnown RBP13.21□□□□□ -0.29
COMMD4-209ENST00000564068 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 PAIP2BQ9ULR5 123 aaKnown RBP13.21□□□□□ -0.29
COMMD4-209ENST00000564068 TISP43B9A030 160 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 OCRLQ01968 901 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 BLMHQ13867 455 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 CCNG2Q16589 344 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 FAM102AQ5T9C2 384 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-209ENST00000564068 RNF43Q68DV7 783 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 SWSAP1Q6NVH7 229 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 PTF1AQ7RTS3 328 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 POU5F2Q8N7G0 328 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 FEZF2Q8TBJ5 459 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 INPP5DQ92835 1189 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 COA1Q9GZY4 146 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 WARS2Q9UGM6 360 aaKnown RBP13.21□□□□□ -0.29
COMMD4-209ENST00000564068 RIC1Q4ADV7 1423 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 TCRBV7S2A1N4TA0A589 114 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 HLA-DRAP01903 254 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 ARL4AP40617 200 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 PPP4CP60510 307 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 STX1BP61266 288 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 NOP9Q86U38 636 aaKnown RBP13.21□□□□□ -0.29
COMMD4-209ENST00000564068 PPIL6Q8IXY8 311 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 TLCD1Q96CP7 247 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 POLR3CQ9BUI4 534 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-209ENST00000564068 TMEM8AQ9HCN3 771 aa13.21□□□□□ -0.29
COMMD4-209ENST00000564068 CHCHD3Q9NX63 227 aaKnown RBP13.21□□□□□ -0.29
COMMD4-209ENST00000564068 GPR75-ASB3A0A0A6YYF3 556 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 E7ENQ6 273 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 PIK3CDO00329 1044 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 EEF1DP29692 281 aaKnown RBP13.21□□□□□ -0.3
COMMD4-209ENST00000564068 IFRD2Q12894 506 aaPredicted RBP13.21□□□□□ -0.3
COMMD4-209ENST00000564068 NBPF20Q3BBV1 942 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 C6orf89Q6UWU4 347 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 TTLL6Q8N841 843 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 LRRC57Q8N9N7 239 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 RNF217Q8TC41 542 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 TMA16Q96EY4 203 aaKnown RBP13.21□□□□□ -0.3
COMMD4-209ENST00000564068 HAUS8Q9BT25 410 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 DRC3Q9H069 523 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 PPCSQ9HAB8 311 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 PICK1Q9NRD5 415 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 DTNAQ9Y4J8 743 aa13.21□□□□□ -0.3
COMMD4-209ENST00000564068 PSMG1O95456 288 aa13.2□□□□□ -0.3
COMMD4-209ENST00000564068 COPAP53621 1224 aa13.2□□□□□ -0.3
COMMD4-209ENST00000564068 ZNF699Q32M78 642 aa13.2□□□□□ -0.3
COMMD4-209ENST00000564068 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
COMMD4-209ENST00000564068 ARMC3Q5W041 872 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms