RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 GPR161Q8N6U8 529 aaKnown RBP10.32□□□□□ -0.76
CLN6-203ENST00000563917 ATAD1Q8NBU5 361 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 SHKBP1Q8TBC3 707 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 SPPL2BQ8TCT7 592 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 CLDN23Q96B33 292 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 ZSWIM3Q96MP5 696 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 ZSCAN16Q9H4T2 348 aaPredicted RBP10.32□□□□□ -0.76
CLN6-203ENST00000563917 C8orf33Q9H7E9 229 aaPredicted RBP10.32□□□□□ -0.76
CLN6-203ENST00000563917 THG1LQ9NWX6 298 aaKnown RBP10.32□□□□□ -0.76
CLN6-203ENST00000563917 ZMYM5Q9UJ78 669 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 CLIC4Q9Y696 253 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 STYXL1Q9Y6J8 313 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 NOTCH4Q99466 2003 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 ANO9A1A5B4 782 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 KPNA7A9QM74 516 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 ANKRD63C9JTQ0 380 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 CHADO15335 359 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 FAM189A1O60320 539 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 HUS1O60921 280 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 CYP11A1P05108 521 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 SYT1P21579 422 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 GARTP22102 1010 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 GABRR2P28476 465 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 CCR3P51677 355 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 MLLT6P55198 1093 aaPredicted RBP10.31□□□□□ -0.76
CLN6-203ENST00000563917 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 MYL7Q01449 175 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 STK38Q15208 465 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 NFE2Q16621 373 aaPredicted RBP10.31□□□□□ -0.76
CLN6-203ENST00000563917 ARHGAP29Q52LW3 1261 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 L1TD1Q5T7N2 865 aaKnown RBP10.31□□□□□ -0.76
CLN6-203ENST00000563917 GPR158Q5T848 1215 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 ARID3BQ8IVW6 561 aaPredicted RBP10.31□□□□□ -0.76
CLN6-203ENST00000563917 CCDC65Q8IXS2 484 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 INTS4Q96HW7 963 aaKnown RBP10.31□□□□□ -0.76
CLN6-203ENST00000563917 FAM213AQ9BRX8 229 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 TMEM206Q9H813 350 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 LMAN1LQ9HAT1 526 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 ABI2Q9NYB9 513 aaPredicted RBP10.31□□□□□ -0.76
CLN6-203ENST00000563917 RBAKQ9NYW8 714 aaPredicted RBP10.31□□□□□ -0.76
CLN6-203ENST00000563917 TBC1D7Q9P0N9 293 aa10.31□□□□□ -0.76
CLN6-203ENST00000563917 FBXO2Q9UK22 296 aaPredicted RBP10.31□□□□□ -0.76
CLN6-203ENST00000563917 MYMKA6NI61 221 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 PPEF2O14830 753 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 KIAA0391O15091 583 aaKnown RBP10.3□□□□□ -0.76
CLN6-203ENST00000563917 KRT19P08727 400 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 TMEM191BP0C7N4 346 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 SDHBP21912 280 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 CCNE1P24864 410 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 AVPR1AP37288 418 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 AMPD3Q01432 767 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 WSCD1Q658N2 575 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 USP49Q70CQ1 688 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 TMC8Q8IU68 726 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 TMEM130Q8N3G9 435 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 LRRC15Q8TF66 581 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 EXOC4Q96A65 974 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 ZNF396Q96N95 335 aaPredicted RBP10.3□□□□□ -0.76
CLN6-203ENST00000563917 CLIC6Q96NY7 704 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 FIZ1Q96SL8 496 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 PANK2Q9BZ23 570 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 ZCWPW1Q9H0M4 648 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 DNAJC25Q9H1X3 360 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 CHRDQ9H2X0 955 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 TASP1Q9H6P5 420 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 OLFML3Q9NRN5 406 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 PANK4Q9NVE7 773 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 OBP2AQ9NY56 170 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 GMEB2Q9UKD1 530 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 AGAP1Q9UPQ3 857 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 PCDHB5Q9Y5E4 795 aa10.3□□□□□ -0.76
CLN6-203ENST00000563917 SLC38A8A6NNN8 435 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 TISP43B9A030 160 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 STX6O43752 255 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 MOSPD3O75425 235 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 SOAT2O75908 522 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 TNNC2P02585 160 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 HSP90AA1P07900 732 aaKnown RBP10.29□□□□□ -0.76
CLN6-203ENST00000563917 CXCL12P48061 93 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 RPL10AP62906 217 aaKnown RBP10.29□□□□□ -0.76
CLN6-203ENST00000563917 RBP5P82980 135 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 AMPD2Q01433 879 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 FCHO2Q0JRZ9 810 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 BFSP1Q12934 665 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 MYO1EQ12965 1108 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 MTAPQ13126 283 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 RESTQ13127 1097 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 SLC39A14Q15043 492 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 SURF1Q15526 300 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 DGKKQ5KSL6 1271 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 CC2D1AQ6P1N0 951 aaPredicted RBP10.29□□□□□ -0.76
CLN6-203ENST00000563917 GAREM2Q75VX8 874 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 RALGPS2Q86X27 583 aaPredicted RBP10.29□□□□□ -0.76
CLN6-203ENST00000563917 BRSK2Q8IWQ3 736 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 MAML2Q8IZL2 1156 aaPredicted RBP10.29□□□□□ -0.76
CLN6-203ENST00000563917 TMEM86AQ8N2M4 240 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 CELF5Q8N6W0 485 aaKnown RBP10.29□□□□□ -0.76
CLN6-203ENST00000563917 PDILTQ8N807 584 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 OR10T2Q8NGX3 314 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 BPIFB1Q8TDL5 484 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms