RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 CDH23Q9H251 3354 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 C5orf67F2Z3F1 127 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 TACC1O75410 805 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 KRT5P13647 590 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 RFX1P22670 979 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 PAX3P23760 479 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 ACAT1P24752 427 aaKnown RBP28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 DNAJB1P25685 340 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 CDR1P51861 262 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 NDST1P52848 882 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 PLCB3Q01970 1234 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 ELAVL2Q12926 359 aaKnown RBP28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 VARS2Q5ST30 1063 aaKnown RBP28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 PRSS55Q6UWB4 352 aaPredicted RBP28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 DPH6Q7L8W6 267 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 VPS52Q8N1B4 723 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 WHAMMQ8TF30 809 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 AUTS2Q8WXX7 1259 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 TRIOBPQ9H2D6 2365 aa28.85■■■□□ 2.21
SH3GL3-205ENST00000563901 C2CD2LO14523 706 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 SOD2P04179 222 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 PDGFRBP09619 1106 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 TYMPP19971 482 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 WARSP23381 471 aaKnown RBP28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 KRT17Q04695 432 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 INCA1Q0VD86 236 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 PRPF38BQ5VTL8 546 aaKnown RBP28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 OVOS1Q6IE37 1185 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 TMEM270Q6UE05 265 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 ENOSF1Q7L5Y1 443 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 PPFIBP1Q86W92 1011 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 ARNTL2Q8WYA1 636 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 FAXDC2Q96IV6 333 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 SPAG5Q96R06 1193 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 LPIN3Q9BQK8 851 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 TTPALQ9BTX7 342 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 HERC2P3Q9BVR0 1158 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 PLVAPQ9BX97 442 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 SNX25Q9H3E2 840 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 DPEP3Q9H4B8 488 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 ACP6Q9NPH0 428 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 DDX43Q9NXZ2 648 aaKnown RBP28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 CAPN11Q9UMQ6 739 aa28.84■■■□□ 2.21
SH3GL3-205ENST00000563901 EPOPA6NHQ4 379 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 LRRC53A6NM62 1247 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 SYN3O14994 580 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 CILPO75339 1184 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 ADKP55263 362 aaKnown RBP28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 YWHAHQ04917 246 aaPredicted RBP28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 CCDC142Q17RM4 750 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 USP41Q3LFD5 358 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 E4F1Q66K89 784 aaPredicted RBP28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 METTL23Q86XA0 190 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 TMEM86AQ8N2M4 240 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 FBXO22Q8NEZ5 403 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 ELOVL4Q9GZR5 314 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 A0A1W2PQJ5 194 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 CARNS1A5YM72 827 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 GABRDO14764 452 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 GRM6O15303 877 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 GNL1P36915 607 aaPredicted RBP28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 KIAA0319Q5VV43 1072 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 SPPL3Q8TCT6 385 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 RIN2Q8WYP3 895 aaPredicted RBP28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 TMEM209Q96SK2 561 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 CHST7Q9NS84 486 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 DSEQ9UL01 958 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 BARX2Q9UMQ3 279 aaPredicted RBP28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 STXBP5LQ9Y2K9 1186 aa28.83■■■□□ 2.21
SH3GL3-205ENST00000563901 GFPT2O94808 682 aa28.82■■■□□ 2.2
SH3GL3-205ENST00000563901 PSMC1P62191 440 aaKnown RBP28.82■■■□□ 2.2
SH3GL3-205ENST00000563901 LRIT3Q3SXY7 679 aa28.82■■■□□ 2.2
SH3GL3-205ENST00000563901 PDXDC1Q6P996 788 aa28.82■■■□□ 2.2
SH3GL3-205ENST00000563901 RBBP8NLQ8NC74 664 aaPredicted RBP28.82■■■□□ 2.2
SH3GL3-205ENST00000563901 OR10T2Q8NGX3 314 aa28.82■■■□□ 2.2
SH3GL3-205ENST00000563901 FAM81BQ96LP2 452 aa28.82■■■□□ 2.2
SH3GL3-205ENST00000563901 A0A1W2PPC1 479 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 A8MXQ7 604 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 CYP26A1O43174 497 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 ATP2C2O75185 946 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 ARID5AQ03989 594 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 TRIM14Q14142 442 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 POF1BQ8WVV4 589 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 SAMD11Q96NU1 681 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 C11orf84Q9BUA3 381 aaPredicted RBP28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 ZBP1Q9H171 429 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 LUC7L2Q9Y383 392 aaKnown RBP28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 PCDHGC5Q9Y5F6 944 aa28.81■■■□□ 2.2
SH3GL3-205ENST00000563901 RB1P06400 928 aa28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 RPL17P18621 184 aaKnown RBP28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 KRT9P35527 623 aa28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 SOX5P35711 763 aa28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 GLUD2P49448 558 aa28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 RAD23BP54727 409 aa28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 ERVFC1P60507 584 aa28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 YWHAEP62258 255 aaKnown RBP28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 GPM6BQ13491 265 aa28.8■■■□□ 2.2
SH3GL3-205ENST00000563901 MRPL58Q14197 206 aaKnown RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms