RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 CTNND2Q9UQB3 1225 aa9.48□□□□□ -0.89
NSMCE1-206ENST00000563900 USP15Q9Y4E8 981 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-206ENST00000563900 DENND4AQ7Z401 1863 aa9.48□□□□□ -0.89
NSMCE1-206ENST00000563900 C2orf16Q68DN1 1984 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 TACC1O75410 805 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 RFPL2O75678 378 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 ZMYND10O75800 440 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 FAM163BP0C2L3 166 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 EPB41P11171 864 aaKnown RBP9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 KRT13P13646 458 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 ATF2P15336 505 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 NLRP12P59046 1061 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 MYL6P60660 151 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 MYO1EQ12965 1108 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 GPR17Q13304 367 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 NCOA4Q13772 614 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 CYP26C1Q6V0L0 522 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 EP400NLQ6ZTU2 488 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 FRMD5Q7Z6J6 570 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 GPR149Q86SP6 731 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 OSTM1Q86WC4 334 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 TMEM86AQ8N2M4 240 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 C12orf76Q8N812 135 aaPredicted RBP9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 SLC35C1Q96A29 364 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 SYAP1Q96A49 352 aaPredicted RBP9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 TMEM209Q96SK2 561 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 ZCWPW1Q9H0M4 648 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 TMEM8AQ9HCN3 771 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 ZDHHC7Q9NXF8 308 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 TMEM63CQ9P1W3 806 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 CDH22Q9UJ99 828 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 MAFFQ9ULX9 164 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 NME7Q9Y5B8 376 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 SNX9Q9Y5X1 595 aa9.47□□□□□ -0.89
NSMCE1-206ENST00000563900 DOCK6Q96HP0 2047 aa9.46□□□□□ -0.89
NSMCE1-206ENST00000563900 MTMR11A4FU01 709 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 PMM2O15305 246 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 SEC24AO95486 1093 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 HLA-DRAP01903 254 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 C8AP07357 584 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 HNRNPA1P09651 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 OR4Q2P0C623 313 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 SPATA31D3P0C874 917 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 WARSP23381 471 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 ERCC5P28715 1186 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 GCLMP48507 274 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 STX17P56962 302 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 BIRC3Q13489 604 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 CBX2Q14781 532 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 UVSSAQ2YD98 709 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 CBWD6Q4V339 395 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 CBWD3Q5JTY5 395 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 CBWD5Q5RIA9 395 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 RARS2Q5T160 578 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 CCDC183Q5T5S1 534 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 KRT39Q6A163 491 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 RNF19BQ6ZMZ0 732 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 SPATA31D4Q6ZUB0 917 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 LRRTM3Q86VH5 581 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 IRF2BP1Q8IU81 584 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 TRIM59Q8IWR1 403 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 TCEAL8Q8IYN2 117 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 ADGRF2Q8IZF7 708 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 TAS1R2Q8TE23 839 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 TAF4BQ92750 862 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 NECTIN4Q96NY8 510 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 ACBD6Q9BR61 282 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 PRKD2Q9BZL6 878 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 CRISPLD1Q9H336 500 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 APOBEC3GQ9HC16 384 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 METTL14Q9HCE5 456 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 HSFX1Q9UBD0 423 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 ARMCX3Q9UH62 379 aaPredicted RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 COQ4Q9Y3A0 265 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 TCF20Q9UGU0 1960 aaKnown RBP9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 NOTCH4Q99466 2003 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 DOCK8Q8NF50 2099 aa9.46□□□□□ -0.9
NSMCE1-206ENST00000563900 CCDC195A0A1B0GUA6 201 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 HCRTO43612 131 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 HUS1O60921 280 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 LRRN2O75325 713 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 GNA14O95837 355 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 ASPAP45381 313 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 LHX1P48742 406 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 MXI1P50539 228 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 ZP2Q05996 745 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 SMARCB1Q12824 385 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 TRPC3Q13507 836 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 ZNF699Q32M78 642 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 WDR72Q3MJ13 1102 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 INTS6LQ5JSJ4 861 aaKnown RBP9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 LIN9Q5TKA1 542 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 FAM171BQ6P995 826 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 ELMSAN1Q6PJG2 1045 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 TMC5Q6UXY8 1006 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 CCDC149Q6ZUS6 474 aa9.45□□□□□ -0.9
NSMCE1-206ENST00000563900 METTL23Q86XA0 190 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms