RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 KPNA7A9QM74 516 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 MOSPD3O75425 235 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 KRT19P08727 400 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 CD72P21854 359 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 FCARP24071 287 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 MGAT5BQ3V5L5 792 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 LMBRD2Q68DH5 695 aaPredicted RBP19.07■□□□□ 0.64
NME3-205ENST00000563854 TPRG1Q6ZUI0 275 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 NT5DC4Q86YG4 428 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 GPD1LQ8N335 351 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 SHKBP1Q8TBC3 707 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 ZSCAN18Q8TBC5 510 aaPredicted RBP19.07■□□□□ 0.64
NME3-205ENST00000563854 CACTINQ8WUQ7 758 aaKnown RBP19.07■□□□□ 0.64
NME3-205ENST00000563854 ASB16Q96NS5 453 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 PDE11AQ9HCR9 933 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 KBTBD4Q9NVX7 518 aa19.07■□□□□ 0.64
NME3-205ENST00000563854 POLR2DO15514 142 aaKnown RBP19.06■□□□□ 0.64
NME3-205ENST00000563854 MICAL2O94851 1124 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 TMEM191BP0C7N4 346 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 CASP1P29466 404 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 PNPLA4P41247 253 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 VIPR2P41587 438 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 EPHA5P54756 1037 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 STARD6P59095 220 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 PRKCQQ04759 706 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 TMC8Q8IU68 726 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 C1orf127Q8N9H9 656 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 SMARCD2Q92925 531 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 LPIN3Q9BQK8 851 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 MTMR12Q9C0I1 747 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 ZCWPW1Q9H0M4 648 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 BLZF1Q9H2G9 400 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 BRD9Q9H8M2 597 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 ABI2Q9NYB9 513 aaPredicted RBP19.06■□□□□ 0.64
NME3-205ENST00000563854 FAM13BQ9NYF5 915 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 GTF3C3Q9Y5Q9 886 aa19.06■□□□□ 0.64
NME3-205ENST00000563854 KANSL1LA0AUZ9 987 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 DNM1Q05193 864 aaKnown RBP19.05■□□□□ 0.64
NME3-205ENST00000563854 VEPH1Q14D04 833 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 TAF12Q16514 161 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 FAM26FQ5R3K3 315 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 STXBP5Q5T5C0 1151 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 GPIHBP1Q8IV16 184 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 NELFCDQ8IXH7 590 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 CSGALNACT2Q8N6G5 542 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 TRMT61BQ9BVS5 477 aaKnown RBP19.05■□□□□ 0.64
NME3-205ENST00000563854 ATXN3LQ9H3M9 355 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 ZNF334Q9HCZ1 680 aaPredicted RBP19.05■□□□□ 0.64
NME3-205ENST00000563854 HEBP1Q9NRV9 189 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 PCDHA7Q9UN72 937 aa19.05■□□□□ 0.64
NME3-205ENST00000563854 R3HCC1Q9Y3T6 440 aaKnown RBP19.05■□□□□ 0.64
NME3-205ENST00000563854 CACNA1HO95180 2353 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 PDIA4P13667 645 aaKnown RBP19.04■□□□□ 0.64
NME3-205ENST00000563854 GABRR2P28476 465 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 GDI1P31150 447 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 NBL1P41271 181 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 AFMP43652 599 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 SCARA3Q6AZY7 606 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 VITQ6UXI7 678 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 DNAJB7Q7Z6W7 309 aaPredicted RBP19.04■□□□□ 0.64
NME3-205ENST00000563854 ITIH5Q86UX2 942 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 CBWD2Q8IUF1 395 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 GIPC2Q8TF65 315 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 PSMG2Q969U7 264 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 BORCS6Q96GS4 357 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 ANKRD36BP1Q96IX9 119 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 LRRC3Q9BY71 257 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 HSPBP1Q9NZL4 362 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 ITGA11Q9UKX5 1188 aa19.04■□□□□ 0.64
NME3-205ENST00000563854 MTF2Q9Y483 593 aaPredicted RBP19.04■□□□□ 0.64
NME3-205ENST00000563854 FAM170BA6NMN3 283 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 EIF3DO15371 548 aaKnown RBP eCLIP19.03■□□□□ 0.64
NME3-205ENST00000563854 HUS1O60921 280 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 GLULP15104 373 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 TUFMP49411 452 aaKnown RBP19.03■□□□□ 0.64
NME3-205ENST00000563854 TSPY1Q01534 308 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 ASCL5Q7RTU5 278 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 LRRTM3Q86VH5 581 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 YAF2Q8IY57 180 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 GRAMD1CQ8IYS0 662 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 DCP1BQ8IZD4 617 aaKnown RBP19.03■□□□□ 0.64
NME3-205ENST00000563854 PDCL2Q8N4E4 241 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 C7orf25Q9BPX7 421 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 BCO2Q9BYV7 579 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 MAGEF1Q9HAY2 307 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 LTB4R2Q9NPC1 389 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 DLGAP2Q9P1A6 1054 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 CFAP45Q9UL16 551 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 L1RE1Q9UN81 338 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 ASB3Q9Y575 518 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 SNX9Q9Y5X1 595 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 MIA3Q5JRA6 1907 aa19.03■□□□□ 0.64
NME3-205ENST00000563854 NCANO14594 1321 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 PTPRJQ12913 1337 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 ZNF233A6NK53 670 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 HEPACAM2A8MVW5 462 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 KIAA0391O15091 583 aaKnown RBP19.02■□□□□ 0.64
NME3-205ENST00000563854 TNNC2P02585 160 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 PSMC3P17980 439 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 ATF6P18850 670 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms