RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PKDREJQ9NTG1 2253 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 SHANK1Q9Y566 2161 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 A0A087WZ62 844 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 A0A087X0B3 334 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 IGHV1OR15-9A0A0B4J2B8 117 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 PCDHGA12O60330 932 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 KIF4AO95239 1232 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 SEC24AO95486 1093 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 CHRM1P11229 460 aaPredicted RBP11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 SKOR1P84550 965 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 WDR45BQ5MNZ6 344 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 FHL5Q5TD97 284 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 ATCAYQ86WG3 371 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 PTRH1Q86Y79 214 aaKnown RBP11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 CKAP2LQ8IYA6 745 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 RHPN1Q8TCX5 695 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 RFFLQ8WZ73 363 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 FDXACB1Q9BRP7 624 aaPredicted RBP11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 LRRC3Q9BY71 257 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 ASCL3Q9NQ33 180 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 KCNH7Q9NS40 1196 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 CUEDC1Q9NWM3 386 aaPredicted RBP11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 GEMIN8Q9NWZ8 242 aaKnown RBP11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 CLCA2Q9UQC9 943 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 NFE2L3Q9Y4A8 694 aa11.91□□□□□ -0.5
HDGFL3-204ENST00000563790 ANTXRLA6NF34 631 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 K7EQS6 105 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 ENC1O14682 589 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 RNF113AO15541 343 aaKnown RBP11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 CCNE2O96020 404 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 FGFR3P22607 806 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 MAOBP27338 520 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 GRIK3Q13003 919 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 INAVAQ3KP66 663 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 SLC8B1Q6J4K2 584 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 TRMT2AQ8IZ69 625 aaKnown RBP11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 PGBD3Q8N328 593 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 DNASE2BQ8WZ79 361 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 FOXJ1Q92949 421 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 VCPIP1Q96JH7 1222 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 NIFKQ9BYG3 293 aaKnown RBP11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 ANAPC2Q9UJX6 822 aa11.9□□□□□ -0.5
HDGFL3-204ENST00000563790 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 CLDN1O95832 211 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 ARSAP15289 507 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 ACADVLP49748 655 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 SEC13P55735 322 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 MRPS21P82921 87 aaKnown RBP11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 ITGB3BPQ13352 177 aaPredicted RBP11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 DCAF6Q58WW2 860 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 SWSAP1Q6NVH7 229 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 USP17L6PQ6QN14 398 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 ZNF410Q86VK4 478 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 DGKHQ86XP1 1220 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 DDX27Q96GQ7 796 aaKnown RBP11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 GPATCH3Q96I76 525 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 MMS19Q96T76 1030 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 THSD1Q9NS62 852 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 DONSONQ9NYP3 566 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 IPPQ9Y573 584 aa11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 MAFBQ9Y5Q3 323 aaPredicted RBP11.89□□□□□ -0.51
HDGFL3-204ENST00000563790 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 SGK1O00141 431 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 IPO5O00410 1097 aaKnown RBP11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 MEIS2O14770 477 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 FOXP2O15409 715 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 MPOP05164 745 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 ZFYP08048 801 aaPredicted RBP11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 HOXA11P31270 313 aaPredicted RBP11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 CLCN6P51797 869 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 TWF1Q12792 350 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 DNAJC3Q13217 504 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 ANKS3Q6ZW76 656 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 ZCCHC9Q8N567 271 aaKnown RBP11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 KBTBD3Q8NAB2 608 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 TXNDC5Q8NBS9 432 aaKnown RBP11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 ARHGAP45Q92619 1136 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 CCDC97Q96F63 343 aaPredicted RBP11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 GIT1Q9Y2X7 761 aa11.88□□□□□ -0.51
HDGFL3-204ENST00000563790 TCRBV21S2A2A0A5A6 115 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 EFSO43281 561 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 PRKCBP05771 671 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 LSSP48449 732 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 GABREP78334 506 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 DRP2Q13474 957 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 HSF5Q4G112 596 aaPredicted RBP11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 SGO2Q562F6 1265 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 TRMT1LQ7Z2T5 733 aaKnown RBP11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 FAM9BQ8IZU0 186 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 ALLCQ8N6M5 410 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 IL17RCQ8NAC3 791 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 SGF29Q96ES7 293 aa11.87□□□□□ -0.51
HDGFL3-204ENST00000563790 CCNL2Q96S94 520 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms