RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 COL14A1Q05707 1796 aaKnown RBP11.02□□□□□ -0.65
RNF40-204ENST00000563683 A8MUI8 341 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 F5H423 210 aaPredicted RBP11.02□□□□□ -0.65
RNF40-204ENST00000563683 UNC5CO95185 931 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 RASSF2P50749 326 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 ORC1Q13415 861 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 LBRQ14739 615 aaKnown RBP11.02□□□□□ -0.65
RNF40-204ENST00000563683 CYP4A22Q5TCH4 519 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 PPP1R2P3Q6NXS1 205 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 CCNYQ8ND76 341 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 SEPT1Q8WYJ6 367 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 CFAP36Q96G28 342 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 SENP7Q9BQF6 1050 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 MYH1P12882 1939 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 TMEM120BA0PK00 339 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 M0QYV0 167 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 NDC80O14777 642 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 STK10O94804 968 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 NPTXRO95502 500 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 CAV1Q03135 178 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 CYP24A1Q07973 514 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 FAM102AQ5T9C2 384 aaPredicted RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 ZDHHC24Q6UX98 284 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 C4orf33Q8N1A6 199 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 OR6B3Q8NGW1 331 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 PPP1R12CQ9BZL4 782 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 ALG13Q9NP73 1137 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 RPTORQ8N122 1335 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 GRAP2O75791 330 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 IREB2P48200 963 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 RAB27AP51159 221 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 KLC1Q07866 573 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 IFRD2Q12894 506 aaPredicted RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 TNFAIP8L3Q5GJ75 292 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 GPAT2Q6NUI2 795 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 EXOC3L1Q86VI1 746 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 EPS8L1Q8TE68 723 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 CKAP2Q8WWK9 683 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 SREK1Q8WXA9 508 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 GPRASP2Q96D09 838 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 MED10Q9BTT4 135 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 MTFR1LQ9H019 292 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 DCTN4Q9UJW0 460 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 NCANO14594 1321 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 YDJCA8MPS7 323 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 DDX3YO15523 660 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 CSDE1O75534 798 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 LMNAP02545 664 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 ADRB2P07550 413 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 GNAT1P11488 350 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 ATP6V1C1P21283 382 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 RPL21P46778 160 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 RPS6KA3P51812 740 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 RAD23BP54727 409 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 CUL2Q13617 745 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 ZC3H3Q8IXZ2 948 aaKnown RBP11.01□□□□□ -0.65
RNF40-204ENST00000563683 FITM2Q8N6M3 262 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 ALG3Q92685 438 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 TTC17Q96AE7 1141 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 FAM167AQ96KS9 214 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 MIS12Q9H081 205 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 ELP3Q9H9T3 547 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 NEU2Q9Y3R4 380 aa11.01□□□□□ -0.65
RNF40-204ENST00000563683 VWA5AO00534 786 aa11□□□□□ -0.65
RNF40-204ENST00000563683 PLSCR1O15162 318 aa11□□□□□ -0.65
RNF40-204ENST00000563683 ZBED1O96006 694 aa11□□□□□ -0.65
RNF40-204ENST00000563683 TXNP10599 105 aaKnown RBP11□□□□□ -0.65
RNF40-204ENST00000563683 SAT1P21673 171 aa11□□□□□ -0.65
RNF40-204ENST00000563683 ABL2P42684 1182 aa11□□□□□ -0.65
RNF40-204ENST00000563683 GCLCP48506 637 aaPredicted RBP11□□□□□ -0.65
RNF40-204ENST00000563683 ARL4CP56559 192 aa11□□□□□ -0.65
RNF40-204ENST00000563683 JAG1P78504 1218 aa11□□□□□ -0.65
RNF40-204ENST00000563683 ACVR2BQ13705 512 aa11□□□□□ -0.65
RNF40-204ENST00000563683 SPARCL1Q14515 664 aa11□□□□□ -0.65
RNF40-204ENST00000563683 DAB2IPQ5VWQ8 1189 aa11□□□□□ -0.65
RNF40-204ENST00000563683 SCYL3Q8IZE3 742 aa11□□□□□ -0.65
RNF40-204ENST00000563683 FBXO41Q8TF61 875 aa11□□□□□ -0.65
RNF40-204ENST00000563683 TEKT4Q8WW24 435 aa11□□□□□ -0.65
RNF40-204ENST00000563683 FAF2Q96CS3 445 aa11□□□□□ -0.65
RNF40-204ENST00000563683 PCYOX1Q9UHG3 505 aa11□□□□□ -0.65
RNF40-204ENST00000563683 PNMA3Q9UL41 463 aa11□□□□□ -0.65
RNF40-204ENST00000563683 NENFQ9UMX5 172 aa11□□□□□ -0.65
RNF40-204ENST00000563683 A0A0G2JND7 137 aa11□□□□□ -0.65
RNF40-204ENST00000563683 C19orf81C9J6K1 198 aa11□□□□□ -0.65
RNF40-204ENST00000563683 OATP04181 439 aa11□□□□□ -0.65
RNF40-204ENST00000563683 MYBPC2Q14324 1141 aa11□□□□□ -0.65
RNF40-204ENST00000563683 UGCGQ16739 394 aa11□□□□□ -0.65
RNF40-204ENST00000563683 SGSM1Q2NKQ1 1148 aa11□□□□□ -0.65
RNF40-204ENST00000563683 KCNT1Q5JUK3 1230 aa11□□□□□ -0.65
RNF40-204ENST00000563683 STK32AQ8WU08 396 aa11□□□□□ -0.65
RNF40-204ENST00000563683 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
RNF40-204ENST00000563683 MTMR12Q9C0I1 747 aa11□□□□□ -0.65
RNF40-204ENST00000563683 C17orf75Q9HAS0 396 aa11□□□□□ -0.65
RNF40-204ENST00000563683 MYH4Q9Y623 1939 aa11□□□□□ -0.65
RNF40-204ENST00000563683 IGLV3-22A0A075B6J6 115 aa11□□□□□ -0.65
RNF40-204ENST00000563683 DPPA5A6NC42 116 aa11□□□□□ -0.65
RNF40-204ENST00000563683 CDH16O75309 829 aa11□□□□□ -0.65
RNF40-204ENST00000563683 CDH6P55285 790 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms