RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 F8W810 466 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 CYB561D2O14569 222 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 TACC1O75410 805 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 ABL1P00519 1130 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 ITGB1P05556 798 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 CFHP08603 1231 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 MAGEA1P43355 309 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 AARSP49588 968 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMG1-208ENST00000563448 DEFB103AP81534 67 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 RNASELQ05823 741 aaKnown RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 SPA17Q15506 151 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 PAN2Q504Q3 1202 aaKnown RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 TIGD5Q53EQ6 642 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 CCDC122Q5T0U0 273 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 COL13A1Q5TAT6 717 aaPredicted RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 DCLRE1AQ6PJP8 1040 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 DPH6Q7L8W6 267 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 VPS36Q86VN1 386 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 ZNF677Q86XU0 584 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 DNAAF5Q86Y56 855 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 TOP6BLQ8N6T0 577 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 APPL2Q8NEU8 664 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 ZNF606Q8WXB4 792 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 TOP1MTQ969P6 601 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 TMEM176AQ96HP8 235 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 FAM193BQ96PV7 902 aaPredicted RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 SEPT11Q9NVA2 429 aaKnown RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 HCSTQ9UBK5 93 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 CCP110O43303 1012 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 THAP12O43422 761 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 HCRTO43612 131 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 HUS1O60921 280 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 DGKIO75912 1065 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 B3GAT3O94766 335 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 KIF4AO95239 1232 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 AMHP03971 560 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 PAEPP09466 180 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 BRD2P25440 801 aaKnown RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 SSTR3P32745 418 aaPredicted RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 ARHGAP25P42331 645 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 BRCC3P46736 316 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 VAV2P52735 878 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 WDR5P61964 334 aaKnown RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 FPGSQ05932 587 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 ALKBH5Q6P6C2 394 aaKnown RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 TMCO2Q7Z6W1 182 aaPredicted RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 OSTM1Q86WC4 334 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 PDCL2Q8N4E4 241 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 TTC39CQ8N584 583 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 HASPINQ8TF76 798 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 TFAP2BQ92481 460 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 ABHD8Q96I13 439 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 TAS2R14Q9NYV8 317 aa10.84□□□□□ -0.67
SMG1-208ENST00000563448 PUF60Q9UHX1 559 aaKnown RBP10.84□□□□□ -0.67
SMG1-208ENST00000563448 I3L4J1 428 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 BAIAP3O94812 1187 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 IPO7O95373 1038 aaKnown RBP10.83□□□□□ -0.68
SMG1-208ENST00000563448 SYN1P17600 705 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 WARSP23381 471 aaKnown RBP10.83□□□□□ -0.68
SMG1-208ENST00000563448 OR1G1P47890 313 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 PPIGQ13427 754 aaKnown RBP eCLIP10.83□□□□□ -0.683e-7■□□□□ 11.2
SMG1-208ENST00000563448 DSTYKQ6XUX3 929 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 OTOP2Q7RTS6 562 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 KIAA1328Q86T90 577 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 UNC93AQ86WB7 457 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 ADGRF2Q8IZF7 708 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 OR6B3Q8NGW1 331 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 NT5C1AQ9BXI3 368 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 PACSIN1Q9BY11 444 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 MRPL9Q9BYD2 267 aaKnown RBP10.83□□□□□ -0.68
SMG1-208ENST00000563448 LACRTQ9GZZ8 138 aa10.83□□□□□ -0.68
SMG1-208ENST00000563448 MKI67P46013 3256 aaKnown RBP10.83□□□□□ -0.68
SMG1-208ENST00000563448 PLXNA4Q9HCM2 1894 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 FAM170AA1A519 330 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 TMCO5BA8MYB1 307 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 TMEM189-UBE2V1I3L0A0 370 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 M0QZQ0 153 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 PJA2O43164 708 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 EFCAB14O75071 495 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 CYP1A1P04798 512 aaPredicted RBP10.82□□□□□ -0.68
SMG1-208ENST00000563448 FAM163BP0C2L3 166 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 LMO2P25791 158 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 GNL1P36915 607 aaPredicted RBP10.82□□□□□ -0.68
SMG1-208ENST00000563448 EPHB4P54760 987 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 C10orf76Q5T2E6 689 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 WSCD1Q658N2 575 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 ZNF662Q6ZS27 426 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 ZNF365Q70YC5 407 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 RSPH1Q8WYR4 309 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 ZNF689Q96CS4 500 aaPredicted RBP10.82□□□□□ -0.68
SMG1-208ENST00000563448 HTATIP2Q9BUP3 242 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 DPEP3Q9H4B8 488 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 RC3H2Q9HBD1 1191 aaKnown RBP10.82□□□□□ -0.68
SMG1-208ENST00000563448 TRIM10Q9UDY6 481 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 STXBP5LQ9Y2K9 1186 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 A8MXQ7 604 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 GABRDO14764 452 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 NRP1O14786 923 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 FGBP02675 491 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 VDRP11473 427 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms