RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 CCDC91Q7Z6B0 441 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 RAB11FIP4Q86YS3 637 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 CCDC170Q8IYT3 715 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 ADGRG2Q8IZP9 1017 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 SH2D3CQ8N5H7 860 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 Q8NFD4 153 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 TOR1AIP2Q8NFQ8 470 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 DNAJB8Q8NHS0 232 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 UTP4Q969X6 686 aaKnown RBP5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 SLC35A4Q96G79 324 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 TSGA13Q96PP4 275 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 JAM3Q9BX67 310 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 GPR63Q9BZJ6 419 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 CDIP1Q9H305 208 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 PIH1D1Q9NWS0 290 aaKnown RBP5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 KCNK4Q9NYG8 393 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 STOML1Q9UBI4 398 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 CPA4Q9UI42 421 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 PCDHA13Q9Y5I0 950 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 ZFP37Q9Y6Q3 630 aaPredicted RBP5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 PXDNQ92626 1479 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 MYBBP1AQ9BQG0 1328 aaKnown RBP5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 MAPK8IP3Q9UPT6 1336 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 ISM1B1AKI9 464 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 H3BUI4 141 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 THEGLP0DJG4 465 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 NPR1P16066 1061 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 RXRAP19793 462 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 ATP5F1P24539 256 aaPredicted RBP5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 HADHAP40939 763 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 HNF4AP41235 474 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 DPP6P42658 865 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 USP11P51784 963 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 PNLIPRP1P54315 467 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 LGALS4P56470 323 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 UBXN2AP68543 259 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 HNRNPUQ00839 825 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 LRMPQ12912 555 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 EFR3AQ14156 821 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 TRIM25Q14258 630 aaKnown RBP5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 PLS1Q14651 629 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 RAB30Q15771 203 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 SETMARQ53H47 684 aaPredicted RBP5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 E4F1Q66K89 784 aaPredicted RBP5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 MBLAC2Q68D91 279 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 ALKBH5Q6P6C2 394 aaKnown RBP5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 HHIPL2Q6UWX4 724 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 ARHGAP36Q6ZRI8 547 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 KCTD6Q8NC69 237 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 PPP1R14CQ8TAE6 165 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 UBASH3BQ8TF42 649 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 RUFY2Q8WXA3 655 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 DDX17Q92841 729 aaKnown RBP5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 MSLNLQ96KJ4 702 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 C2orf40Q9H1Z8 148 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 PRDM13Q9H4Q3 707 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 CYP4F11Q9HBI6 524 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 CYP4F12Q9HCS2 524 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 RAXQ9Y2V3 346 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 ABCC6O95255 1503 aa5.72□□□□□ -1.49
VPS35P1-201ENST00000563400 INSRP06213 1382 aa5.71□□□□□ -1.49
VPS35P1-201ENST00000563400 NHSL1Q5SYE7 1610 aa5.71□□□□□ -1.49
VPS35P1-201ENST00000563400 KIAA0232Q92628 1395 aa5.71□□□□□ -1.49
VPS35P1-201ENST00000563400 MEGF11A6BM72 1044 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 H0Y626 953 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 TMPRSS2O15393 492 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 MTSS1O43312 755 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 GAS2O43903 313 aaKnown RBP5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 ADAM11O75078 769 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 COL6A2P12110 1019 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 KRT10P13645 584 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 CHMP24386 653 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 TPP2P29144 1249 aaPredicted RBP5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 HOXC9P31274 260 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 TNNT2P45379 298 aaPredicted RBP5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 MTHFSP49914 203 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 CCT4P50991 539 aaKnown RBP5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 VAMP2P63027 116 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 POU4F1Q01851 419 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 ID3Q02535 119 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 TMEM132BQ14DG7 1078 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 PPA1Q15181 289 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 RRAGBQ5VZM2 374 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 BORAQ6PGQ7 559 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 FBXO38Q6PIJ6 1188 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 TMTC3Q6ZXV5 915 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 CDC37L1Q7L3B6 337 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 ZZZ3Q8IYH5 903 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 NUP93Q8N1F7 819 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 CSGALNACT1Q8TDX6 532 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 PANK1Q8TE04 598 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 RSAD2Q8WXG1 361 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 RAX2Q96IS3 184 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 C16orf92Q96LL3 132 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 FCRL3Q96P31 734 aaPredicted RBP5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 EYA3Q99504 573 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 GDF15Q99988 308 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 ACE2Q9BYF1 805 aaPredicted RBP5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 POFUT1Q9H488 388 aa5.71□□□□□ -1.5
VPS35P1-201ENST00000563400 DEF6Q9H4E7 631 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms