RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 TMEM174Q8WUU8 243 aa20.48■□□□□ 0.87
TRADD-203ENST00000563348 CCDC47Q96A33 483 aaKnown RBP20.48■□□□□ 0.87
TRADD-203ENST00000563348 CORO1BQ9BR76 489 aa20.48■□□□□ 0.87
TRADD-203ENST00000563348 HSFX1Q9UBD0 423 aa20.48■□□□□ 0.87
TRADD-203ENST00000563348 DUSP12Q9UNI6 340 aa20.48■□□□□ 0.87
TRADD-203ENST00000563348 R3HCC1Q9Y3T6 440 aaKnown RBP20.48■□□□□ 0.87
TRADD-203ENST00000563348 YIPF1Q9Y548 306 aa20.48■□□□□ 0.87
TRADD-203ENST00000563348 ZNF197O14709 1029 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 EXOC3O60645 756 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 HUS1O60921 280 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 PRPF40AO75400 957 aaKnown RBP20.47■□□□□ 0.87
TRADD-203ENST00000563348 MICAL2O94851 1124 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 RHOBTB3O94955 611 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 BFSP1Q12934 665 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 SLC5A9Q2M3M2 681 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 CYP4A22Q5TCH4 519 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 SLC9A9Q8IVB4 645 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 NPAS3Q8IXF0 933 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 CCDC127Q96BQ5 260 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 FNBP1Q96RU3 617 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 KCTD10Q9H3F6 313 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 DMAC2Q9NW81 257 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 GDE1Q9NZC3 331 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 SLC27A5Q9Y2P5 690 aa20.47■□□□□ 0.87
TRADD-203ENST00000563348 GOLGA6L4A6NEF3 574 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 PDXKO00764 312 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 DLATP10515 647 aaKnown RBP20.46■□□□□ 0.87
TRADD-203ENST00000563348 TNNI1P19237 187 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 ALDH1A3P47895 512 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 SMARCB1Q12824 385 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 MYO1EQ12965 1108 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 PLD1Q13393 1074 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 SLC39A12Q504Y0 691 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 PRSS36Q5K4E3 855 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 PARM1Q6UWI2 310 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 TRAPPC11Q7Z392 1133 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 LRRTM3Q86VH5 581 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 SUGP1Q8IWZ8 645 aaKnown RBP20.46■□□□□ 0.87
TRADD-203ENST00000563348 TMEM86AQ8N2M4 240 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 PDCL2Q8N4E4 241 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 CCDC34Q96HJ3 373 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 CGRRF1Q99675 332 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 L1RE1Q9UN81 338 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 SNX9Q9Y5X1 595 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 NUMBLQ9Y6R0 609 aa20.46■□□□□ 0.87
TRADD-203ENST00000563348 NARSO43776 548 aaKnown RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 PDGFBP01127 241 aaPredicted RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 TUFMP49411 452 aaKnown RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 EPHB3P54753 998 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 EPHA5P54756 1037 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 KCNB1Q14721 858 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 POTEHQ6S545 545 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 MTSS1LQ765P7 747 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 PDZD4Q76G19 769 aaPredicted RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 DPH6Q7L8W6 267 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 DCP1BQ8IZD4 617 aaKnown RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 HS6ST3Q8IZP7 471 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 FMR1NBQ8N0W7 255 aaPredicted RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 TOP6BLQ8N6T0 577 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 LEMD2Q8NC56 503 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 ST13P5Q8NFI4 369 aaPredicted RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 SPATA18Q8TC71 538 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 ING5Q8WYH8 240 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 FGF14Q92915 247 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 TCEAL4Q96EI5 215 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 MCRS1Q96EZ8 462 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 HPDLQ96IR7 371 aa20.45■□□□□ 0.86
TRADD-203ENST00000563348 RPP25Q9BUL9 199 aaKnown RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 GZF1Q9H116 711 aaPredicted RBP20.45■□□□□ 0.86
TRADD-203ENST00000563348 KIF20AO95235 890 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 CST3P01034 146 aaPredicted RBP20.44■□□□□ 0.86
TRADD-203ENST00000563348 SRFP11831 508 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 CEBPBP17676 345 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 CCR2P41597 374 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 LIMS2Q7Z4I7 341 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 C2orf15Q8WU43 125 aaKnown RBP20.44■□□□□ 0.86
TRADD-203ENST00000563348 ZNF516Q92618 1163 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 ACBD6Q9BR61 282 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 LRRC3Q9BY71 257 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 DNAJC25Q9H1X3 360 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 ASAH2Q9NR71 780 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 WNT16Q9UBV4 365 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 ASB3Q9Y575 518 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 CACNA1HO95180 2353 aa20.44■□□□□ 0.86
TRADD-203ENST00000563348 GABRDO14764 452 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 MOSPD3O75425 235 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 LHX1P48742 406 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 MYL7Q01449 175 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 TSPY1Q01534 308 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 SNW1Q13573 536 aaKnown RBP20.43■□□□□ 0.86
TRADD-203ENST00000563348 SOWAHAQ2M3V2 549 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 DNAJB7Q7Z6W7 309 aaPredicted RBP20.43■□□□□ 0.86
TRADD-203ENST00000563348 TTC9BQ8N6N2 239 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 ENGASEQ8NFI3 743 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 SPPL2BQ8TCT7 592 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 KCNH6Q9H252 994 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 DDX43Q9NXZ2 648 aaKnown RBP20.43■□□□□ 0.86
TRADD-203ENST00000563348 FBXL21Q9UKT6 434 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 TRAF3IP3Q9Y228 551 aa20.43■□□□□ 0.86
TRADD-203ENST00000563348 CALUO43852 315 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms