RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 A0A1W2PPL8 197 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 GRID2IPA4D2P6 1211 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 CAPN8A6NHC0 703 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 PHGDHO43175 533 aaKnown RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 PROM1O43490 865 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 PEX1O43933 1283 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 SUN1O94901 812 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 SLPIP03973 132 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 ATXN1LP0C7T5 689 aaKnown RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 RPL17P18621 184 aaKnown RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 ITGALP20701 1170 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 ZNF135P52742 658 aaPredicted RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 PTTG1IPP53801 180 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 SOX8P57073 446 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 RAB1AP62820 205 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 HLTFQ14527 1009 aaKnown RBP eCLIP3.71□□□□□ -1.824e-7■■■□□ 14.8
CHD9-207ENST00000562806 ZNF267Q14586 743 aaPredicted RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 GEN1Q17RS7 908 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 ARHGAP29Q52LW3 1261 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 SLC44A4Q53GD3 710 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 TEDDM1Q5T9Z0 273 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 Q6YL49 198 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 Q6ZNX1 250 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 ZNF627Q7L945 461 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 GPR149Q86SP6 731 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 SH2D3CQ8N5H7 860 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 KBTBD7Q8WVZ9 684 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 NACC2Q96BF6 587 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 CCDC136Q96JN2 1154 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 LRGUKQ96M69 825 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 ACO2Q99798 780 aaKnown RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 C1orf43Q9BWL3 253 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 TLR10Q9BXR5 811 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 TINAGL1Q9GZM7 467 aaPredicted RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 SLITRK6Q9H5Y7 841 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 SLAMF7Q9NQ25 335 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 KCTD5Q9NXV2 234 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 G3BP2Q9UN86 482 aaKnown RBP3.71□□□□□ -1.82
CHD9-207ENST00000562806 MED16Q9Y2X0 877 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 RAD54BQ9Y620 910 aa3.71□□□□□ -1.82
CHD9-207ENST00000562806 A0A0B4J269 797 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 ISM1B1AKI9 464 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 MYO1CO00159 1063 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 MPPED1O15442 326 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 FRS3O43559 492 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 HRGP04196 525 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 PIM1P11309 404 aaPredicted RBP3.7□□□□□ -1.82
CHD9-207ENST00000562806 FOLR3P41439 243 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 VIPR2P41587 438 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 NPTX2P47972 431 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 SEC24CP53992 1094 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 WNT3P56703 355 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 SCAPQ12770 1279 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 TUBB3Q13509 450 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 PTPRRQ15256 657 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 LAYNQ6UX15 382 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 ZNF783Q6ZMS7 281 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 TMPRSS9Q7Z410 1059 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 PPP1R32Q7Z5V6 425 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 PPP1R3BQ86XI6 285 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 ADGRG5Q8IZF4 528 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 B3GALNT2Q8NCR0 500 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 CAGE1Q8TC20 777 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 ASB10Q8WXI3 467 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 NELL1Q92832 810 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 Q96MF0 132 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 AIFM2Q9BRQ8 373 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 ALG8Q9BVK2 526 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 GEMIN8Q9NWZ8 242 aaKnown RBP3.7□□□□□ -1.82
CHD9-207ENST00000562806 ZSCAN32Q9NX65 697 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 LRIT1Q9P2V4 623 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 GABBR1Q9UBS5 961 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 NOB1Q9ULX3 412 aaKnown RBP3.7□□□□□ -1.82
CHD9-207ENST00000562806 SLC45A2Q9UMX9 530 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 DMRT1Q9Y5R6 373 aa3.7□□□□□ -1.82
CHD9-207ENST00000562806 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 PRSS29PA6NIE9 313 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 E9PLN8 166 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 F5H697 171 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 M0QYG6 137 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 NDUFV1P49821 464 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 FAM193AP78312 1265 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 MRPS35P82673 323 aaKnown RBP3.69□□□□□ -1.82
CHD9-207ENST00000562806 GBX1Q14549 363 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 IQCB1Q15051 598 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 LONRF3Q496Y0 759 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 LMBRD2Q68DH5 695 aaPredicted RBP3.69□□□□□ -1.82
CHD9-207ENST00000562806 PPP4R4Q6NUP7 873 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 VWA1Q6PCB0 445 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 NPNTQ6UXI9 565 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 Q6ZPA2 131 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 MAEAQ7L5Y9 396 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 VRK3Q8IV63 474 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 KIAA0319LQ8IZA0 1049 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 FAM9AQ8IZU1 332 aaPredicted RBP3.69□□□□□ -1.82
CHD9-207ENST00000562806 ZBTB34Q8NCN2 500 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 PSD4Q8NDX1 1056 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 OR6B3Q8NGW1 331 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms