RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 SMIM5Q71RC9 77 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 RNF180Q86T96 592 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 TRMT2AQ8IZ69 625 aaKnown RBP5.82□□□□□ -1.48
SMG1-206ENST00000562668 NGEFQ8N5V2 710 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 EAF2Q96CJ1 260 aaPredicted RBP5.82□□□□□ -1.48
SMG1-206ENST00000562668 TTC1Q99614 292 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 TEX101Q9BY14 249 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 WDR11Q9BZH6 1224 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 DKK2Q9UBU2 259 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 USP16Q9Y5T5 823 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 SCN7AQ01118 1682 aa5.82□□□□□ -1.48
SMG1-206ENST00000562668 RPTORQ8N122 1335 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 ZNF185O15231 689 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 ADCY6O43306 1168 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 ZEB2O60315 1214 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 PHF2O75151 1096 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 FBLP22087 321 aaKnown RBP5.81□□□□□ -1.48
SMG1-206ENST00000562668 ID4P47928 161 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 USP14P54578 494 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 MFSD14BQ5SR56 506 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 PRIMA1Q86XR5 153 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 THNSL2Q86YJ6 484 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 WDR63Q8IWG1 891 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 CPEB3Q8NE35 698 aaKnown RBP5.81□□□□□ -1.48
SMG1-206ENST00000562668 ZFP28Q8NHY6 868 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 RAX2Q96IS3 184 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 DPP7Q9UHL4 492 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 ZNHIT2Q9UHR6 403 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 TSPYL4Q9UJ04 414 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 LRP5O75197 1615 aa5.81□□□□□ -1.48
SMG1-206ENST00000562668 SOS1Q07889 1333 aaPredicted RBP5.8□□□□□ -1.48
SMG1-206ENST00000562668 FANCIQ9NVI1 1328 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 MARCH11A6NNE9 402 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 PJA2O43164 708 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 SNRPA1P09661 255 aaKnown RBP5.8□□□□□ -1.48
SMG1-206ENST00000562668 DDX6P26196 483 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMG1-206ENST00000562668 CRKLP46109 303 aaKnown RBP5.8□□□□□ -1.48
SMG1-206ENST00000562668 AVPR1BP47901 424 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 EIF5P55010 431 aaKnown RBP5.8□□□□□ -1.48
SMG1-206ENST00000562668 GNAI1P63096 354 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 GUCY1B3Q02153 619 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 FAM102AQ5T9C2 384 aaPredicted RBP5.8□□□□□ -1.48
SMG1-206ENST00000562668 COL23A1Q86Y22 540 aaPredicted RBP5.8□□□□□ -1.48
SMG1-206ENST00000562668 TTC5Q8N0Z6 440 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 LCORLQ8N3X6 602 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 C8orf58Q8NAV2 365 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 SUPT20HQ8NEM7 779 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 TSR2Q969E8 191 aaKnown RBP5.8□□□□□ -1.48
SMG1-206ENST00000562668 EDARQ9UNE0 448 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 ZBTB1Q9Y2K1 713 aa5.8□□□□□ -1.48
SMG1-206ENST00000562668 NRXN2Q9P2S2 1712 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 ZAR1LA6NP61 321 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 A1BGP04217 495 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 HLA-DOAP06340 250 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 SLFN5Q08AF3 891 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 TSPYL6Q8N831 410 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 NEU1Q99519 415 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 ADAM2Q99965 735 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 TEX13AQ9BXU3 409 aaPredicted RBP5.79□□□□□ -1.48
SMG1-206ENST00000562668 RIOX1Q9H6W3 641 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 SYBUQ9NX95 663 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 STK32BQ9NY57 414 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 USP15Q9Y4E8 981 aaPredicted RBP5.79□□□□□ -1.48
SMG1-206ENST00000562668 FPGT-TNNI3KV9GXZ4 949 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 KIAA1551Q9HCM1 1747 aa5.79□□□□□ -1.48
SMG1-206ENST00000562668 NUP98P52948 1817 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 ANKRD36CQ5JPF3 1778 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 UNC119BA6NIH7 251 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 CXorf49A8MYA2 514 aaPredicted RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 AKR1B10O60218 316 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 HOXB7P09629 217 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 TYRP1P17643 537 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 PTPN7P35236 360 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 PIP4K2AP48426 406 aaPredicted RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 CHN2P52757 468 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 GYS2P54840 703 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 MRPS9P82933 396 aaKnown RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 CDK17Q00537 523 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 CALD1Q05682 793 aaKnown RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 STRN3Q13033 797 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 PROSER3Q2NL68 480 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 FAM47AQ5JRC9 791 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 GJC2Q5T442 439 aaPredicted RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 ATXN7L2Q5T6C5 722 aaPredicted RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 METRNLQ641Q3 311 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 OLFML1Q6UWY5 402 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 DDX46Q7L014 1031 aaKnown RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 ZNF572Q7Z3I7 529 aaPredicted RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 NOP9Q86U38 636 aaKnown RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 CMTR2Q8IYT2 770 aaKnown RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 REPS2Q8NFH8 660 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 OR7D4Q8NG98 312 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 SLC35B2Q8TB61 432 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 TSPEARQ8WU66 669 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 AUTS2Q8WXX7 1259 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 RIN2Q8WYP3 895 aaPredicted RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 COQ10AQ96MF6 247 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 BCO1Q9HAY6 547 aa5.78□□□□□ -1.48
SMG1-206ENST00000562668 LAS1LQ9Y4W2 734 aaKnown RBP5.78□□□□□ -1.48
SMG1-206ENST00000562668 AFDNP55196 1824 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms