RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 NFIL3Q16649 462 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 ISM2Q6H9L7 571 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 OSTM1Q86WC4 334 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 METTL23Q86XA0 190 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 TTC9BQ8N6N2 239 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 HPDLQ96IR7 371 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 MYADMQ96S97 322 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 OXCT2Q9BYC2 517 aaPredicted RBP16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 GDAP2Q9NXN4 497 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 DNMT3BQ9UBC3 853 aaKnown RBP16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 HOOK1Q9UJC3 728 aaKnown RBP16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 MAN1B1Q9UKM7 699 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 USTQ9Y2C2 406 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 SNX9Q9Y5X1 595 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 WDFY4Q6ZS81 3184 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 MTMR11A4FU01 709 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 HCRTO43612 131 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 HUS1O60921 280 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 XYLBO75191 536 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 AKAP3O75969 853 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 POU2F2P09086 479 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 COBLL1Q53SF7 1204 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 GET4Q7L5D6 327 aaPredicted RBP16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 BMP8AQ7Z5Y6 402 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 LRRTM3Q86VH5 581 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 ZCWPW1Q9H0M4 648 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 FRMD4BQ9Y2L6 1034 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 YIPF1Q9Y548 306 aa16.53■□□□□ 0.24
CCNDBP1-203ENST00000562553 LRG1P02750 347 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 ASGR2P07307 311 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 GBP2P32456 591 aaPredicted RBP16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 PMS1P54277 932 aaKnown RBP16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 MYL6P60660 151 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 CLDN10P78369 228 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 TWF1Q12792 350 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 MYO1EQ12965 1108 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 DUSP4Q13115 394 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 ADAM9Q13443 819 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 SOWAHAQ2M3V2 549 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 SLC39A12Q504Y0 691 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 C1orf220Q5T0J3 134 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 HFE2Q6ZVN8 426 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 RTL10Q7L3V2 364 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 OTOP3Q7RTS5 596 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 ADGRF2Q8IZF7 708 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 ZDHHC14Q8IZN3 488 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 THEM5Q8N1Q8 247 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 TOP6BLQ8N6T0 577 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 ITFG1Q8TB96 612 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 ACSF2Q96CM8 615 aaPredicted RBP16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 EEF2KMTQ96G04 330 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 LIMD1Q9UGP4 676 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 SLC27A5Q9Y2P5 690 aa16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 R3HCC1Q9Y3T6 440 aaKnown RBP16.52■□□□□ 0.24
CCNDBP1-203ENST00000562553 TRIM49BA6NDI0 452 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 SOAT2O75908 522 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 VNN1O95497 513 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 C4BPAP04003 597 aaKnown RBP16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 BMP6P22004 513 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 FSHRP23945 695 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 ACAT1P24752 427 aaKnown RBP16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 BIRC3Q13489 604 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 CCDC142Q17RM4 750 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 EDRF1Q3B7T1 1238 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 CENPPQ6IPU0 288 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 LIMS2Q7Z4I7 341 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 FAM186BQ8IYM0 893 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 ADSSL1Q8N142 457 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 TMEM86AQ8N2M4 240 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 KBTBD7Q8WVZ9 684 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 XYLT2Q9H1B5 865 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 TMLHEQ9NVH6 421 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 DDX43Q9NXZ2 648 aaKnown RBP16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 CEP72Q9P209 647 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 MAFFQ9ULX9 164 aa16.51■□□□□ 0.23
CCNDBP1-203ENST00000562553 BIN1O00499 593 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 NRG2O14511 850 aaPredicted RBP16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 GABRDO14764 452 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 MAPK13O15264 365 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 PHACTR2O75167 634 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 RHOP08100 348 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 TRIM49P0CI25 452 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 TRIM49CP0CI26 452 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 RPL13P26373 211 aaKnown RBP16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 VAMP7P51809 220 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 ZXDAP98168 799 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 TRPC3Q13507 836 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 SLC5A9Q2M3M2 681 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 PABPC1LQ4VXU2 614 aaKnown RBP16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 ANKRD40Q6AI12 368 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 TRIM67Q6ZTA4 783 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 PLCD3Q8N3E9 789 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 ST13P5Q8NFI4 369 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms