RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 MAPK6Q16659 721 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 CLLU1OSQ5K130 101 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 TTC39AQ5SRH9 613 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 PKN3Q6P5Z2 889 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 AGMOQ6ZNB7 445 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 GRASPQ7Z6J2 395 aaPredicted RBP6.79□□□□□ -1.32
TCF4-213ENST00000562543 GALNT15Q8N3T1 639 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 ITFG1Q8TB96 612 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 KIF2CQ99661 725 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 PLEKHA4Q9H4M7 779 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 BRD9Q9H8M2 597 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 ZNF334Q9HCZ1 680 aaPredicted RBP6.79□□□□□ -1.32
TCF4-213ENST00000562543 MBNL3Q9NUK0 354 aaKnown RBP6.79□□□□□ -1.32
TCF4-213ENST00000562543 ZNF215Q9UL58 517 aaPredicted RBP6.79□□□□□ -1.32
TCF4-213ENST00000562543 ISY1Q9ULR0 285 aaKnown RBP6.79□□□□□ -1.32
TCF4-213ENST00000562543 SVILO95425 2214 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 TEX28O15482 410 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 SUV39H1O43463 412 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 EIF3JO75822 258 aaKnown RBP6.78□□□□□ -1.32
TCF4-213ENST00000562543 SLC1A4P43007 532 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 MLLT6P55198 1093 aaPredicted RBP6.78□□□□□ -1.32
TCF4-213ENST00000562543 SP2Q02086 613 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 G3BP1Q13283 466 aaKnown RBP eCLIP6.78□□□□□ -1.32
TCF4-213ENST00000562543 ORC1Q13415 861 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 MARCH8Q5T0T0 291 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 SLC23A3Q6PIS1 610 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 KCTD1Q719H9 257 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 ZC3H18Q86VM9 953 aaKnown RBP6.78□□□□□ -1.32
TCF4-213ENST00000562543 SPACA3Q8IXA5 215 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 SYNPOQ8N3V7 929 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 LCORLQ8N3X6 602 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 PIGKQ92643 395 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 ELSPBP1Q96BH3 223 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 NXPE2Q96DL1 559 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 CEP95Q96GE4 821 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 MSANTD3Q96H12 275 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 ZNF512BQ96KM6 892 aaPredicted RBP6.78□□□□□ -1.32
TCF4-213ENST00000562543 IWS1Q96ST2 819 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 NPHS2Q9NP85 383 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 MTMR4Q9NYA4 1195 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 NBEAL1Q6ZS30 2694 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 MYH7P12883 1935 aa6.78□□□□□ -1.32
TCF4-213ENST00000562543 NIPBLQ6KC79 2804 aaeCLIP6.77□□□□□ -1.32
TCF4-213ENST00000562543 KNTC1P50748 2209 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 FAM149AA5PLN7 773 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 PLK4O00444 970 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 APAF1O14727 1248 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 CBFA2T3O75081 653 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 ZC3H11AO75152 810 aaKnown RBP eCLIP6.77□□□□□ -1.33
TCF4-213ENST00000562543 TTLL1O95922 423 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 C1RP00736 705 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 SSBP05455 408 aaKnown RBP eCLIP6.77□□□□□ -1.33
TCF4-213ENST00000562543 FUT4P22083 530 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 FCARP24071 287 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 GBP1P32455 592 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 NFKB2Q00653 900 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 GRM2Q14416 872 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 DSC3Q14574 896 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 CYP27C1Q4G0S4 372 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 PREPLQ4J6C6 727 aaPredicted RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 HP1BP3Q5SSJ5 553 aaPredicted RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 SYDE2Q5VT97 1194 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 TANGO2Q6ICL3 276 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 C1orf228Q6PIY5 440 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 NAXDQ8IW45 347 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 CAMKK1Q8N5S9 505 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 NSUN6Q8TEA1 469 aaKnown RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 SNRNP27Q8WVK2 155 aaKnown RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 FAM168AQ92567 244 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 FANCD2OSQ96PS1 177 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 TAAR1Q96RJ0 339 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 RPS6KC1Q96S38 1066 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 MRPL9Q9BYD2 267 aaKnown RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 CELF4Q9BZC1 486 aaKnown RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 FAM49AQ9H0Q0 323 aaPredicted RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 ZFYVE1Q9HBF4 777 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 MRPL17Q9NRX2 175 aaKnown RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 CRIM1Q9NZV1 1036 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 COL20A1Q9P218 1284 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 STK39Q9UEW8 545 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 NOC2LQ9Y3T9 749 aaKnown RBP6.77□□□□□ -1.33
TCF4-213ENST00000562543 GON4LQ3T8J9 2241 aa6.77□□□□□ -1.33
TCF4-213ENST00000562543 MED13Q9UHV7 2174 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ZBED9Q6R2W3 1325 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 HELZP42694 1942 aaKnown RBP6.76□□□□□ -1.33
TCF4-213ENST00000562543 M0QZ92 97 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ARNTLO00327 626 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 BIN1O00499 593 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ZNF862O60290 1169 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ATP9AO75110 1047 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 GJB3O75712 270 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 GALTP07902 379 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 SPATA31D3P0C874 917 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 RPL17P18621 184 aaKnown RBP6.76□□□□□ -1.33
TCF4-213ENST00000562543 ITPKAP23677 461 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ATXN3P54252 364 aaPredicted RBP6.76□□□□□ -1.33
TCF4-213ENST00000562543 TMPRSS3P57727 454 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms