RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 NAP1L1P55209 391 aaKnown RBP15.21■□□□□ 0.03
COMMD4-205ENST00000562310 CDH8P55286 799 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 LILRA4P59901 499 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 TUSC3Q13454 348 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 TUBB2AQ13885 445 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 LIMS2Q7Z4I7 341 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 NECAB2Q7Z6G3 386 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 TMEM130Q8N3G9 435 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 APPL2Q8NEU8 664 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 DBF4BQ8NFT6 615 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 TUBB2BQ9BVA1 445 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 IRX2Q9BZI1 471 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-205ENST00000562310 ZNF518BQ9C0D4 1074 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 TAS2R14Q9NYV8 317 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 KANSL3Q9P2N6 904 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 GTF3C4Q9UKN8 822 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 ATP11BQ9Y2G3 1177 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 PCDHGC5Q9Y5F6 944 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 DUSP10Q9Y6W6 482 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 MYH10P35580 1976 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 TSC2P49815 1807 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 ARHGEF37A1IGU5 675 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 MOCS3O95396 460 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 BRD2P25440 801 aaKnown RBP15.2■□□□□ 0.02
COMMD4-205ENST00000562310 CDH5P33151 784 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-205ENST00000562310 NDST1P52848 882 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 HADHBP55084 474 aaKnown RBP15.2■□□□□ 0.02
COMMD4-205ENST00000562310 NOMO3P69849 1222 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 GPC5P78333 572 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 MLLT1Q03111 559 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-205ENST00000562310 ZNF394Q53GI3 561 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 SGO2Q562F6 1265 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 RTN4RL1Q86UN2 441 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-205ENST00000562310 SLC4A11Q8NBS3 891 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 SPATA18Q8TC71 538 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 WHAMMQ8TF30 809 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 VCPIP1Q96JH7 1222 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 ELOVL4Q9GZR5 314 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 WNT8AQ9H1J5 351 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 AVENQ9NQS1 362 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-205ENST00000562310 CAPN6Q9Y6Q1 641 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
COMMD4-205ENST00000562310 ABCB4P21439 1286 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 WARSP23381 471 aaKnown RBP15.19■□□□□ 0.02
COMMD4-205ENST00000562310 NOP2P46087 812 aaKnown RBP15.19■□□□□ 0.02
COMMD4-205ENST00000562310 AARSP49588 968 aaKnown RBP eCLIP15.19■□□□□ 0.02
COMMD4-205ENST00000562310 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
COMMD4-205ENST00000562310 GPNMBQ14956 572 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 SOWAHAQ2M3V2 549 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 NOMO2Q5JPE7 1267 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 LIN9Q5TKA1 542 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 NAA35Q5VZE5 725 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 PHF13Q86YI8 300 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-205ENST00000562310 ADGRF2Q8IZF7 708 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 SYCE1Q8N0S2 351 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 TMEM86AQ8N2M4 240 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 MSANTD4Q8NCY6 345 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 UBE2Q2Q8WVN8 375 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 ZNF653Q96CK0 615 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 PAWRQ96IZ0 340 aaKnown RBP15.19■□□□□ 0.02
COMMD4-205ENST00000562310 MRPL45Q9BRJ2 306 aaKnown RBP15.19■□□□□ 0.02
COMMD4-205ENST00000562310 PPP1R12CQ9BZL4 782 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 THAP2Q9H0W7 228 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 LHX5Q9H2C1 402 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 SNX25Q9H3E2 840 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 RNF19AQ9NV58 838 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 TMEM39AQ9NV64 488 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 MIOSQ9NXC5 875 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 UVRAGQ9P2Y5 699 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 HMGXB4Q9UGU5 601 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 LRFN2Q9ULH4 789 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 INPP5FQ9Y2H2 1132 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 JRKLQ9Y4A0 524 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 TTC3P53804 2025 aa15.19■□□□□ 0.02
COMMD4-205ENST00000562310 ENPP3O14638 875 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 SPTLC1O15269 473 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 BUB1O43683 1085 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 MTA2O94776 668 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 CALCAP01258 141 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 CYP1A2P05177 515 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 CALB1P05937 261 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 CNGA2Q16280 664 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 UPP1Q16831 310 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 CLLU1OSQ5K130 101 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 CNKSR3Q6P9H4 555 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 MCOLN2Q8IZK6 566 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 ABI1Q8IZP0 508 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 TFAP2BQ92481 460 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 CYFIP2Q96F07 1278 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 TNIP3Q96KP6 325 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 TWNKQ96RR1 684 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 L2HGDHQ9H9P8 463 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 SALL4Q9UJQ4 1053 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 L1RE1Q9UN81 338 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.18■□□□□ 0.02
COMMD4-205ENST00000562310 PCDHB7Q9Y5E2 793 aa15.18■□□□□ 0.02
COMMD4-205ENST00000562310 CASTOR2A6NHX0 329 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms