RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 PRSS36Q5K4E3 855 aa25.65■■□□□ 1.7
CDR2-202ENST00000561630 SUGP1Q8IWZ8 645 aaKnown RBP25.65■■□□□ 1.7
CDR2-202ENST00000561630 PDCL2Q8N4E4 241 aa25.65■■□□□ 1.7
CDR2-202ENST00000561630 TMEM174Q8WUU8 243 aa25.65■■□□□ 1.7
CDR2-202ENST00000561630 GDE1Q9NZC3 331 aa25.65■■□□□ 1.7
CDR2-202ENST00000561630 NUMBLQ9Y6R0 609 aa25.65■■□□□ 1.7
CDR2-202ENST00000561630 SCN1AP35498 2009 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 MUC6Q6W4X9 2439 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 DOCK8Q8NF50 2099 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 NARSO43776 548 aaKnown RBP25.64■■□□□ 1.7
CDR2-202ENST00000561630 HUS1O60921 280 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 MICAL2O94851 1124 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 PDGFBP01127 241 aaPredicted RBP25.64■■□□□ 1.7
CDR2-202ENST00000561630 BFSP1Q12934 665 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 PLD1Q13393 1074 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 SLC39A12Q504Y0 691 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 PARM1Q6UWI2 310 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 ING5Q8WYH8 240 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 FGF14Q92915 247 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 FNBP1Q96RU3 617 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 L1RE1Q9UN81 338 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 SLC27A5Q9Y2P5 690 aa25.64■■□□□ 1.7
CDR2-202ENST00000561630 R3HCC1Q9Y3T6 440 aaKnown RBP25.64■■□□□ 1.7
CDR2-202ENST00000561630 ZNF197O14709 1029 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 EXOC3O60645 756 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 PRPF40AO75400 957 aaKnown RBP25.63■■□□□ 1.69
CDR2-202ENST00000561630 RHOBTB3O94955 611 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 DLATP10515 647 aaKnown RBP25.63■■□□□ 1.69
CDR2-202ENST00000561630 EPHA5P54756 1037 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 SMARCB1Q12824 385 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 MYO1EQ12965 1108 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 CYP4A22Q5TCH4 519 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 MTSS1LQ765P7 747 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 PDZD4Q76G19 769 aaPredicted RBP25.63■■□□□ 1.69
CDR2-202ENST00000561630 TMEM86AQ8N2M4 240 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 LEMD2Q8NC56 503 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 CCDC47Q96A33 483 aaKnown RBP25.63■■□□□ 1.69
CDR2-202ENST00000561630 CCDC127Q96BQ5 260 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 CGRRF1Q99675 332 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 KCTD10Q9H3F6 313 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 SNX9Q9Y5X1 595 aa25.63■■□□□ 1.69
CDR2-202ENST00000561630 PDXKO00764 312 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 SRFP11831 508 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 CEBPBP17676 345 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 TNNI1P19237 187 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 CCR2P41597 374 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 ALDH1A3P47895 512 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 EPHB3P54753 998 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 TRAPPC11Q7Z392 1133 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 LRRTM3Q86VH5 581 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 SLC9A9Q8IVB4 645 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 HS6ST3Q8IZP7 471 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 TTC9BQ8N6N2 239 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 TOP6BLQ8N6T0 577 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 ST13P5Q8NFI4 369 aaPredicted RBP25.62■■□□□ 1.69
CDR2-202ENST00000561630 SPATA18Q8TC71 538 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 TCEAL4Q96EI5 215 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 HPDLQ96IR7 371 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 RPP25Q9BUL9 199 aaKnown RBP25.62■■□□□ 1.69
CDR2-202ENST00000561630 GZF1Q9H116 711 aaPredicted RBP25.62■■□□□ 1.69
CDR2-202ENST00000561630 DNAJC25Q9H1X3 360 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 KCNH6Q9H252 994 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 DMAC2Q9NW81 257 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 DOCK6Q96HP0 2047 aa25.62■■□□□ 1.69
CDR2-202ENST00000561630 POTEHQ6S545 545 aa25.61■■□□□ 1.69
CDR2-202ENST00000561630 DCP1BQ8IZD4 617 aaKnown RBP25.61■■□□□ 1.69
CDR2-202ENST00000561630 C2orf15Q8WU43 125 aaKnown RBP25.61■■□□□ 1.69
CDR2-202ENST00000561630 MCRS1Q96EZ8 462 aa25.61■■□□□ 1.69
CDR2-202ENST00000561630 CCDC34Q96HJ3 373 aa25.61■■□□□ 1.69
CDR2-202ENST00000561630 ASAH2Q9NR71 780 aa25.61■■□□□ 1.69
CDR2-202ENST00000561630 WNT16Q9UBV4 365 aa25.61■■□□□ 1.69
CDR2-202ENST00000561630 ZNF318Q5VUA4 2279 aa25.61■■□□□ 1.69
CDR2-202ENST00000561630 TSC2P49815 1807 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 NOTCH4Q99466 2003 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 GOLGA6L4A6NEF3 574 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 TUFMP49411 452 aaKnown RBP25.6■■□□□ 1.69
CDR2-202ENST00000561630 TSPY1Q01534 308 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 KCNB1Q14721 858 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 DPH6Q7L8W6 267 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 LIMS2Q7Z4I7 341 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 FMR1NBQ8N0W7 255 aaPredicted RBP25.6■■□□□ 1.69
CDR2-202ENST00000561630 ACBD6Q9BR61 282 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 FBXL21Q9UKT6 434 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 ASB3Q9Y575 518 aa25.6■■□□□ 1.69
CDR2-202ENST00000561630 NRG2O14511 850 aaPredicted RBP25.59■■□□□ 1.69
CDR2-202ENST00000561630 KIF20AO95235 890 aa25.59■■□□□ 1.69
CDR2-202ENST00000561630 VCPP55072 806 aaKnown RBP25.59■■□□□ 1.69
CDR2-202ENST00000561630 SOWAHAQ2M3V2 549 aa25.59■■□□□ 1.69
CDR2-202ENST00000561630 ADGRF2Q8IZF7 708 aa25.59■■□□□ 1.69
CDR2-202ENST00000561630 SPPL2BQ8TCT7 592 aa25.59■■□□□ 1.69
CDR2-202ENST00000561630 LRRC3Q9BY71 257 aa25.59■■□□□ 1.69
CDR2-202ENST00000561630 SLC2A4RGQ9NR83 387 aa25.59■■□□□ 1.69
CDR2-202ENST00000561630 DDX43Q9NXZ2 648 aaKnown RBP25.59■■□□□ 1.69
CDR2-202ENST00000561630 TCHHQ07283 1943 aa25.59■■□□□ 1.69
CDR2-202ENST00000561630 GABRDO14764 452 aa25.58■■□□□ 1.69
CDR2-202ENST00000561630 MOSPD3O75425 235 aa25.58■■□□□ 1.69
CDR2-202ENST00000561630 SOAT2O75908 522 aa25.58■■□□□ 1.69
CDR2-202ENST00000561630 CST3P01034 146 aaPredicted RBP25.58■■□□□ 1.69
CDR2-202ENST00000561630 NR3C1P04150 777 aa25.58■■□□□ 1.69
CDR2-202ENST00000561630 CFHP08603 1231 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms