RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 CACNA1HO95180 2353 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 PDXKO00764 312 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
CCDC113-203ENST00000561517 TNNC2P02585 160 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 KRT19P08727 400 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 BFSP1Q12934 665 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 DUSP4Q13115 394 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 KCNB1Q14721 858 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 SLC5A9Q2M3M2 681 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 PRSS36Q5K4E3 855 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 NPAS3Q8IXF0 933 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 FMR1NBQ8N0W7 255 aaPredicted RBP16.66■□□□□ 0.26
CCDC113-203ENST00000561517 ELMOD1Q8N336 334 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 SLC44A3Q8N4M1 653 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 ATAD1Q8NBU5 361 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 SPATA18Q8TC71 538 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 CCDC47Q96A33 483 aaKnown RBP16.66■□□□□ 0.26
CCDC113-203ENST00000561517 CGRRF1Q99675 332 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 CORO1BQ9BR76 489 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
CCDC113-203ENST00000561517 L1RE1Q9UN81 338 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 MRPS23Q9Y3D9 190 aaKnown RBP16.66■□□□□ 0.26
CCDC113-203ENST00000561517 HCN4Q9Y3Q4 1203 aa16.66■□□□□ 0.26
CCDC113-203ENST00000561517 EXOC3O60645 756 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 HUS1O60921 280 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 MICAL2O94851 1124 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 EPHA5P54756 1037 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 SMARCB1Q12824 385 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 PLD1Q13393 1074 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 IQCEQ6IPM2 695 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 LIMS2Q7Z4I7 341 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 LRRTM3Q86VH5 581 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 TMEM86AQ8N2M4 240 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 PDCL2Q8N4E4 241 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 FBXL6Q8N531 539 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 TOP6BLQ8N6T0 577 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 ENGASEQ8NFI3 743 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 ZNF512Q96ME7 567 aaPredicted RBP16.65■□□□□ 0.26
CCDC113-203ENST00000561517 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 GDE1Q9NZC3 331 aa16.65■□□□□ 0.26
CCDC113-203ENST00000561517 PTPRDP23468 1912 aa16.64■□□□□ 0.26
CCDC113-203ENST00000561517 GOLGA6L4A6NEF3 574 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 ZNF197O14709 1029 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 KIF20AO95235 890 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
CCDC113-203ENST00000561517 TNNI1P19237 187 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 CCR2P41597 374 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 MYO1EQ12965 1108 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 SNW1Q13573 536 aaKnown RBP16.64■□□□□ 0.25
CCDC113-203ENST00000561517 SLC39A12Q504Y0 691 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 POTEHQ6S545 545 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 PARM1Q6UWI2 310 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 MTSS1LQ765P7 747 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 DPH6Q7L8W6 267 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 TTC9BQ8N6N2 239 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 LEMD2Q8NC56 503 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 PLEKHO2Q8TD55 490 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 C2orf15Q8WU43 125 aaKnown RBP16.64■□□□□ 0.25
CCDC113-203ENST00000561517 ING5Q8WYH8 240 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 ZNF516Q92618 1163 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 FGF14Q92915 247 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 CCDC127Q96BQ5 260 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 TCEAL4Q96EI5 215 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 CCDC34Q96HJ3 373 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 HPDLQ96IR7 371 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 LRRC3Q9BY71 257 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 CIZ1Q9ULV3 898 aaPredicted RBP16.64■□□□□ 0.25
CCDC113-203ENST00000561517 TRAF3IP3Q9Y228 551 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 SLC27A5Q9Y2P5 690 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 R3HCC1Q9Y3T6 440 aaKnown RBP16.64■□□□□ 0.25
CCDC113-203ENST00000561517 SNX9Q9Y5X1 595 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 NUMBLQ9Y6R0 609 aa16.64■□□□□ 0.25
CCDC113-203ENST00000561517 GABRDO14764 452 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 NARSO43776 548 aaKnown RBP16.63■□□□□ 0.25
CCDC113-203ENST00000561517 CEBPBP17676 345 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 ALDH1A3P47895 512 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 EPHB3P54753 998 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 CLDN10P78369 228 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 SOWAHAQ2M3V2 549 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 CYP4A22Q5TCH4 519 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 PDZD4Q76G19 769 aaPredicted RBP16.63■□□□□ 0.25
CCDC113-203ENST00000561517 DCP1BQ8IZD4 617 aaKnown RBP16.63■□□□□ 0.25
CCDC113-203ENST00000561517 HS6ST3Q8IZP7 471 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 GUF1Q8N442 669 aaKnown RBP16.63■□□□□ 0.25
CCDC113-203ENST00000561517 SPPL2BQ8TCT7 592 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 PARD3BQ8TEW8 1205 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 ACBD6Q9BR61 282 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 ASAH2Q9NR71 780 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 ASB3Q9Y575 518 aa16.63■□□□□ 0.25
CCDC113-203ENST00000561517 GREB1Q4ZG55 1949 aa16.62■□□□□ 0.25
CCDC113-203ENST00000561517 F5P12259 2224 aa16.62■□□□□ 0.25
CCDC113-203ENST00000561517 ZNF638Q14966 1978 aaKnown RBP16.62■□□□□ 0.25
CCDC113-203ENST00000561517 NRG2O14511 850 aaPredicted RBP16.62■□□□□ 0.25
CCDC113-203ENST00000561517 MOSPD3O75425 235 aa16.62■□□□□ 0.25
CCDC113-203ENST00000561517 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
CCDC113-203ENST00000561517 PDGFBP01127 241 aaPredicted RBP16.62■□□□□ 0.25
CCDC113-203ENST00000561517 NR3C1P04150 777 aa16.62■□□□□ 0.25
CCDC113-203ENST00000561517 SRFP11831 508 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms