RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 CTNNA3Q9UI47 895 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 ZHX2Q9Y6X8 837 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 WDR33Q9C0J8 1336 aaKnown RBP6.96□□□□□ -1.3
LRRC28-220ENST00000561253 E7EWF7 191 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 CXCL11O14625 94 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 ZNF213O14771 459 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 NMT2O60551 498 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 APEX1P27695 318 aaKnown RBP6.95□□□□□ -1.3
LRRC28-220ENST00000561253 MAP2K2P36507 400 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 TM4SF4P48230 202 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 NT5C2P49902 561 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 BACE1P56817 501 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 ANTXR2P58335 489 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 ADCY2Q08462 1091 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 PDCD1Q15116 288 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 IMMTQ16891 758 aaKnown RBP6.95□□□□□ -1.3
LRRC28-220ENST00000561253 FAM47AQ5JRC9 791 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 CNKSR3Q6P9H4 555 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 CMIPQ8IY22 773 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 MB21D2Q8IYB1 491 aaPredicted RBP6.95□□□□□ -1.3
LRRC28-220ENST00000561253 STPG3Q8N7X2 389 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 ANKS1AQ92625 1134 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 CEP95Q96GE4 821 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 C12orf42Q96LP6 360 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 ACAP3Q96P50 834 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 ANO3Q9BYT9 981 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 KIAA1683Q9H0B3 1180 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 MTMR4Q9NYA4 1195 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 CNOT6Q9ULM6 557 aaKnown RBP6.95□□□□□ -1.3
LRRC28-220ENST00000561253 PTPRFP10586 1907 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 ADGRA2Q96PE1 1338 aa6.95□□□□□ -1.3
LRRC28-220ENST00000561253 GABRDO14764 452 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 REC8O95072 547 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 PLA2G1BP04054 148 aaKnown RBP6.94□□□□□ -1.3
LRRC28-220ENST00000561253 MYBL2P10244 700 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 PI3P19957 117 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 TFAP4Q01664 338 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 KIF23Q02241 960 aaPredicted RBP6.94□□□□□ -1.3
LRRC28-220ENST00000561253 SPP2Q13103 211 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 SSPNQ14714 243 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 MYBPC3Q14896 1274 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 ADCK5Q3MIX3 580 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 KIAA1841Q6NSI8 718 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 CYB5R4Q7L1T6 521 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 FAM129CQ86XR2 697 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 AMOTL1Q8IY63 956 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 LMBR1Q8WVP7 490 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 NYAP2Q9P242 653 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 SYNPO2Q9UMS6 1093 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 TMX2Q9Y320 296 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 KCTD3Q9Y597 815 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 SNX14Q9Y5W7 946 aa6.94□□□□□ -1.3
LRRC28-220ENST00000561253 LOC285556D6RIA3 1793 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 ATAD5Q96QE3 1844 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 MANSC4A6NHS7 340 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-220ENST00000561253 BTBD19C9JJ37 291 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 RFXAPO00287 272 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 MAFGO15525 162 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 IL18BPO95998 194 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 CFBP00751 764 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 SLC3A2P08195 630 aaKnown RBP6.93□□□□□ -1.3
LRRC28-220ENST00000561253 CLEC2LP0C7M8 214 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 C1QTNF9P0C862 333 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 EEF2P13639 858 aaKnown RBP6.93□□□□□ -1.3
LRRC28-220ENST00000561253 HMGCS2P54868 508 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 MANFP55145 182 aaKnown RBP6.93□□□□□ -1.3
LRRC28-220ENST00000561253 BCAR1P56945 870 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 IL13RA1P78552 427 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 ICA1Q05084 483 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 SNAPC2Q13487 334 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 TREML2Q5T2D2 321 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 CASC1Q6TDU7 716 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 MFSD6Q6ZSS7 791 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 RASGRP2Q7LDG7 609 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 FAM43AQ8N2R8 423 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 CBARPQ8N350 705 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-220ENST00000561253 ENAHQ8N8S7 591 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-220ENST00000561253 FNIP1Q8TF40 1166 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 ESR2Q92731 530 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 PWWP2AQ96N64 755 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 RNF41Q9H4P4 317 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-220ENST00000561253 ZNF287Q9HBT7 754 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 KCND1Q9NSA2 647 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 SMG5Q9UPR3 1016 aaKnown RBP6.93□□□□□ -1.3
LRRC28-220ENST00000561253 SPEF1Q9Y4P9 236 aa6.93□□□□□ -1.3
LRRC28-220ENST00000561253 RLFQ13129 1914 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 CCL15-CCL14A0A0B4J2E2 113 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 PRSS38A1L453 326 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 TRIM75PA6NK02 468 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 C19orf81C9J6K1 198 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 RANBP6O60518 1105 aaKnown RBP6.92□□□□□ -1.3
LRRC28-220ENST00000561253 TTLL1O95922 423 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 MT-CO1P00395 513 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 TSPY3P0CV98 308 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 TSPY8P0CW00 308 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 SNHG28P0DPA3 235 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 CETPP11597 493 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 VCAM1P19320 739 aa6.92□□□□□ -1.3
LRRC28-220ENST00000561253 ENPP1P22413 925 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms