RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CTXN3Q4LDR2 81 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 CBWD6Q4V339 395 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 DCAF17Q5H9S7 520 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 ZNF667Q5HYK9 610 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 CBWD3Q5JTY5 395 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 CBWD5Q5RIA9 395 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 CDKAL1Q5VV42 579 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 TCERG1LQ5VWI1 586 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 WSCD1Q658N2 575 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 TPGS2Q68CL5 300 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 SMYD5Q6GMV2 418 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 THEM5Q8N1Q8 247 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 HLA-CQ95604 372 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 MSLNLQ96KJ4 702 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 CNOT6LQ96LI5 555 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 RTP3Q9BQQ7 232 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 ACBD6Q9BR61 282 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 NAT10Q9H0A0 1025 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 DNAJC25Q9H1X3 360 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 UBE2ZQ9H832 354 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 RAB20Q9NX57 234 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 CLEC1BQ9P126 229 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 HSFX1Q9UBD0 423 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 FBXW11Q9UKB1 542 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 NFE2L3Q9Y4A8 694 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 TIMM13Q9Y5L4 95 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 CDY1Q9Y6F8 540 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 MYO10Q9HD67 2058 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 WDR27A2RRH5 827 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 GTPBP10A4D1E9 387 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 LRRC10BA6NIK2 292 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 CSPG5O95196 566 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 CAVIN2O95810 425 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 P4HA1P13674 534 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 ATF2P15336 505 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 EPCAMP16422 314 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 PIK3CAP42336 1068 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 TNNC1P63316 161 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 MYL5Q02045 173 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 DLX2Q07687 328 aaPredicted RBP10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 GPR17Q13304 367 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 UVSSAQ2YD98 709 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 ZNF699Q32M78 642 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 ZSCAN23Q3MJ62 389 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 LEXMQ3ZCV2 418 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 ANKRD54Q6NXT1 300 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 ELMSAN1Q6PJG2 1045 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 CYP26C1Q6V0L0 522 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 TCEAL8Q8IYN2 117 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 CMASQ8NFW8 434 aaPredicted RBP10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 LMO3Q8TAP4 145 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 KBTBD7Q8WVZ9 684 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 PPM1EQ8WY54 764 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 SEMA4DQ92854 862 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 PKMYT1Q99640 499 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 BCO2Q9BYV7 579 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 IMPG2Q9BZV3 1241 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 ZCWPW1Q9H0M4 648 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 IGFLR1Q9H665 355 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 CYP3A43Q9HB55 503 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 SAMSN1Q9NSI8 373 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 DZANK1Q9NVP4 752 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 CLDND1Q9NY35 253 aa10.32□□□□□ -0.76
RABGGTA-221ENST00000561055 SYCE3A1L190 88 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 LRRN2O75325 713 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 POU2F2P09086 479 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 PCSK1P29120 753 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 HOXA9P31269 272 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 CA8P35219 290 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 NOP14P78316 857 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 RBM10P98175 930 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 MYL7Q01449 175 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 CETN1Q12798 172 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 MAN2A1Q16706 1144 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 ANO6Q4KMQ2 910 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 TCP11X2Q5H9J9 407 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 MIIPQ5JXC2 388 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 FAM171BQ6P995 826 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 SYCE2Q6PIF2 218 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 UNC93AQ86WB7 457 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 PALB2Q86YC2 1186 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 ADGRF2Q8IZF7 708 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 SMRP1Q8NCR6 262 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 KREMEN2Q8NCW0 462 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 EHBP1Q8NDI1 1231 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 OR10T2Q8NGX3 314 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 C2orf15Q8WU43 125 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 ATXN2LQ8WWM7 1075 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 MMS19Q96T76 1030 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 TUBGCP2Q9BSJ2 902 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 S1PR5Q9H228 398 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 HSD3B7Q9H2F3 369 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 APOBEC3GQ9HC16 384 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 FANCLQ9NW38 375 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 ZDHHC7Q9NXF8 308 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 DDX43Q9NXZ2 648 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms