RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SNX9Q9Y5X1 595 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 DOCK8Q8NF50 2099 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 TRIM49BA6NDI0 452 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 C2CD4DB7Z1M9 353 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 BIN1O00499 593 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 IKBKBO14920 756 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 CCL16O15467 120 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 STAU1O95793 577 aaKnown RBP16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 CPB1P15086 417 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 CCNE1P24864 410 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 PSMC2P35998 433 aaKnown RBP16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 AP3M2P53677 418 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 MYL6P60660 151 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 ENPEPQ07075 957 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 ADCY1Q08828 1119 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 MYO1EQ12965 1108 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 CAMK4Q16566 473 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 ZACNQ401N2 412 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 SV2AQ7L0J3 742 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 DPH6Q7L8W6 267 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 METTL23Q86XA0 190 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 RNF135Q8IUD6 432 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 FAM186BQ8IYM0 893 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 TMEM86AQ8N2M4 240 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 SPATA18Q8TC71 538 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 KBTBD7Q8WVZ9 684 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 DHTKD1Q96HY7 919 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 PKMYT1Q99640 499 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 MKNK1Q9BUB5 465 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 VRTNQ9H8Y1 702 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 CYP4F11Q9HBI6 524 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 KIAA1468Q9P260 1216 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 MYO10Q9HD67 2058 aa16.41■□□□□ 0.22
SNRPA1-213ENST00000560856 MTMR11A4FU01 709 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 HCRTO43612 131 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 HUS1O60921 280 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 SP100P23497 879 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 ELF1P32519 619 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 VAMP7P51809 220 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 NTHL1P78549 312 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 PPP3CAQ08209 521 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 INTS8Q75QN2 995 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 GRASPQ7Z6J2 395 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 ATAD1Q8NBU5 361 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 PGLYRP2Q96PD5 576 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 DUSP9Q99956 384 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 CLSTN2Q9H4D0 955 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 HCFC1R1Q9NWW0 138 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 DNMT3BQ9UBC3 853 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 NME7Q9Y5B8 376 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 INSL5Q9Y5Q6 135 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 CLUHO75153 1309 aa16.4■□□□□ 0.22
SNRPA1-213ENST00000560856 PRRG1O14668 218 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 CETN3O15182 167 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 TRIM49P0CI25 452 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 TRIM49CP0CI26 452 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 ATICP31939 592 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 FKBP3Q00688 224 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 LRRC63Q05C16 580 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 DUSP4Q13115 394 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 TTI2Q6NXR4 508 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 FOXR2Q6PJQ5 311 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 ZDHHC14Q8IZN3 488 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 THEM5Q8N1Q8 247 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 TTC9BQ8N6N2 239 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 MYADMQ96S97 322 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 ACBD6Q9BR61 282 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 PIDD1Q9HB75 910 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 TMLHEQ9NVH6 421 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 NR2E1Q9Y466 385 aa16.39■□□□□ 0.21
SNRPA1-213ENST00000560856 PI4K2BG5E9Z4 385 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 PSMA7O14818 248 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 XYLBO75191 536 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 FAM163BP0C2L3 166 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 WARSP23381 471 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 LMO2P25791 158 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 PPP1R2P41236 205 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 BIRC3Q13489 604 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 TRPC3Q13507 836 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 NCOA4Q13772 614 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 CCDC142Q17RM4 750 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 SLC39A12Q504Y0 691 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 ADGRF2Q8IZF7 708 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 TRIML1Q8N9V2 468 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 ELMO3Q96BJ8 720 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 TSG101Q99816 390 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 EPHX3Q9H6B9 360 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 AVENQ9NQS1 362 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 DDX43Q9NXZ2 648 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 CEP72Q9P209 647 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 HSFX1Q9UBD0 423 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 SLC27A5Q9Y2P5 690 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 R3HCC1Q9Y3T6 440 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 YIPF1Q9Y548 306 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 TRIOO75962 3097 aa16.38■□□□□ 0.21
SNRPA1-213ENST00000560856 PHACTR2O75167 634 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 TACC1O75410 805 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 HLA-DRAP01903 254 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 ACAT1P24752 427 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms