RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CRACR2AQ9BSW2 395 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 COLEC11Q9BWP8 271 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 BCO2Q9BYV7 579 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 GPR62Q9BZJ7 368 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 XPO4Q9C0E2 1151 aaKnown RBP7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 ZBP1Q9H171 429 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 SDCBP2Q9H190 292 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 GANQ9H2C0 597 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 SMYD3Q9H7B4 428 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.22e-17■■■■■ 96.9
CTDSPL2-210ENST00000560834 AAASQ9NRG9 546 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 GDAP2Q9NXN4 497 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 IFNKQ9P0W0 207 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 MSRAQ9UJ68 235 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 MTUS1Q9ULD2 1270 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 L1RE1Q9UN81 338 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 POLIQ9UNA4 740 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 RWDD3Q9Y3V2 267 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 NUB1Q9Y5A7 615 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 EYSQ5T1H1 3165 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 A0A1W2PQC6 194 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 CARNS1A5YM72 827 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 KPNA7A9QM74 516 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 PES1O00541 588 aaKnown RBP7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 NOL4O94818 638 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 SOD2P04179 222 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 ALDH2P05091 517 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 CYP11A1P05108 521 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 FGFR3P22607 806 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 DNAJB1P25685 340 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 TKTP29401 623 aaKnown RBP7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 RAP1GAPP47736 663 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 ALDH7A1P49419 539 aaKnown RBP7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 UBASH3AP57075 661 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 MYO1EQ12965 1108 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 NR1I3Q14994 352 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 SYCP1Q15431 976 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 SGSM1Q2NKQ1 1148 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 UVSSAQ2YD98 709 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 ZNF667Q5HYK9 610 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 RTP2Q5QGT7 225 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 FKBP15Q5T1M5 1219 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 SWT1Q5T5J6 900 aaKnown RBP7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 GJB7Q6PEY0 223 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 SCARA5Q6ZMJ2 495 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 GBP6Q6ZN66 633 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 TAS1R1Q7RTX1 841 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 OSTM1Q86WC4 334 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 UBR7Q8N806 425 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 EHBP1Q8NDI1 1231 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 GDPD5Q8WTR4 605 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 KBTBD7Q8WVZ9 684 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 KAT5Q92993 513 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 TMEM169Q96HH4 297 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 B3GALT6Q96L58 329 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 SENP8Q96LD8 212 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 KREMEN1Q96MU8 473 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 LSM14BQ9BX40 385 aaKnown RBP7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 IMPG2Q9BZV3 1241 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 TTYH3Q9C0H2 523 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 SPG21Q9NZD8 308 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 APEX2Q9UBZ4 518 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 NME7Q9Y5B8 376 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 PCDHB12Q9Y5F1 795 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 SNX9Q9Y5X1 595 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 FHOD1Q9Y613 1164 aa7.54□□□□□ -1.2
CTDSPL2-210ENST00000560834 ITIH6Q6UXX5 1313 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 TMEM265A0A087WTH1 108 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 H3BNC9 293 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 CYB561D2O14569 222 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 FSCN2O14926 492 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 SYN3O14994 580 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 GRM6O15303 877 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 HCRTO43612 131 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 TADA2AO75478 443 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 AP1G2O75843 785 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 RB1P06400 928 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 ODC1P11926 461 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 TYMPP19971 482 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 WARSP23381 471 aaKnown RBP7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 PAX3P23760 479 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 TNNC1P63316 161 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 GCNT1Q02742 428 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 UBXN1Q04323 297 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 INCA1Q0VD86 236 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 CETN1Q12798 172 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 LRMPQ12912 555 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 ELAVL2Q12926 359 aaKnown RBP7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 CUL2Q13617 745 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 CAMK1Q14012 370 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 SOWAHAQ2M3V2 549 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 WDR72Q3MJ13 1102 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 FILIP1LQ4L180 1135 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 IQCEQ6IPM2 695 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 DSTYKQ6XUX3 929 aa7.53□□□□□ -1.2
CTDSPL2-210ENST00000560834 DDX53Q86TM3 631 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms