RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 M0R296 226 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 PAPLNO95428 1278 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 LAMP2P13473 410 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 CASP4P49662 377 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 EPHB3P54753 998 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 MYL7Q01449 175 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 TSPY1Q01534 308 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 SIGLEC14Q08ET2 396 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 PLD1Q13393 1074 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 TDGQ13569 410 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 SNW1Q13573 536 aaKnown RBP13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 MGAT5BQ3V5L5 792 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 SCARA3Q6AZY7 606 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 UBALD2Q8IYN6 164 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 SMYD4Q8IYR2 804 aaPredicted RBP13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 DCP1BQ8IZD4 617 aaKnown RBP13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 PDCL2Q8N4E4 241 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 ATAD1Q8NBU5 361 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 OR10T2Q8NGX3 314 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 ITFG1Q8TB96 612 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 FAM200AQ8TCP9 573 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 RSAD2Q8WXG1 361 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 ERCC4Q92889 916 aaPredicted RBP13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 FGF13Q92913 245 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 SMARCE1Q969G3 411 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 PBXIP1Q96AQ6 731 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 SMOC2Q9H3U7 446 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 ABI2Q9NYB9 513 aaPredicted RBP13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 IGSF9Q9P2J2 1179 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 EPS15L1Q9UBC2 864 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 CDH7Q9ULB5 785 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 L1RE1Q9UN81 338 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 YIPF1Q9Y548 306 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 TSC2P49815 1807 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 DOCK6Q96HP0 2047 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 ZNF197O14709 1029 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 SOAT2O75908 522 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 POU2F2P09086 479 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 MYL4P12829 197 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 COL9A1P20849 921 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 NR2F2P24468 414 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 ACAT1P24752 427 aaKnown RBP13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 TNNC1P63316 161 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 TAF12Q16514 161 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 CENPPQ6IPU0 288 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 SLC9A9Q8IVB4 645 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 ADGRF2Q8IZF7 708 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 TMEM86AQ8N2M4 240 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 ENGASEQ8NFI3 743 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 MCRS1Q96EZ8 462 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 MFSD14AQ96MC6 490 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 ASAH2Q9NR71 780 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 GDAP2Q9NXN4 497 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 DDX43Q9NXZ2 648 aaKnown RBP13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 FBXL21Q9UKT6 434 aa13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 ZFP37Q9Y6Q3 630 aaPredicted RBP13.93□□□□□ -0.18
CTDSPL2-209ENST00000560620 CST3P01034 146 aaPredicted RBP13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 PCSK1P29120 753 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 LHX1P48742 406 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 TUFMP49411 452 aaKnown RBP13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 SMARCB1Q12824 385 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 VEPH1Q14D04 833 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 SOWAHAQ2M3V2 549 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 WDR72Q3MJ13 1102 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 ISM2Q6H9L7 571 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 HFE2Q6ZVN8 426 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 SUGP1Q8IWZ8 645 aaKnown RBP13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 HS6ST3Q8IZP7 471 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 TTC9BQ8N6N2 239 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 TOP6BLQ8N6T0 577 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 CXorf38Q8TB03 319 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 TIGD1Q96MW7 591 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 RTP3Q9BQQ7 232 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 CRISPLD1Q9H336 500 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 SLITRK6Q9H5Y7 841 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 DMAC2Q9NW81 257 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 CEP72Q9P209 647 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 NXF1Q9UBU9 619 aaKnown RBP13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 TRAF3IP3Q9Y228 551 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 HCN4Q9Y3Q4 1203 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 PCDHB5Q9Y5E4 795 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 PCDHA5Q9Y5H7 936 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 NUMBLQ9Y6R0 609 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 TRIOO75962 3097 aa13.92□□□□□ -0.18
CTDSPL2-209ENST00000560620 LRRIQ3A6PVS8 624 aaPredicted RBP13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 GADD45BO75293 160 aaPredicted RBP13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 KRT13P13646 458 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 AP3M2P53677 418 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 ADAM9Q13443 819 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 SLC5A9Q2M3M2 681 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms