RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, human

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-209	ENST00000560559	FERMT2	Q96AC1	680 aa		5.09	□□□□□ -1.59
BLM-209	ENST00000560559	ASPSCR1	Q9BZE9	553 aa		5.09	□□□□□ -1.59
BLM-209	ENST00000560559	TSPYL1	Q9H0U9	437 aa		5.09	□□□□□ -1.59
BLM-209	ENST00000560559	RSAD1	Q9HA92	442 aa		5.09	□□□□□ -1.59
BLM-209	ENST00000560559	OXSM	Q9NWU1	459 aa		5.09	□□□□□ -1.59
BLM-209	ENST00000560559	ZIM2	Q9NZV7	527 aa		5.09	□□□□□ -1.59
BLM-209	ENST00000560559	USP18	Q9UMW8	372 aa		5.09	□□□□□ -1.59
BLM-209	ENST00000560559	SPEF1	Q9Y4P9	236 aa		5.09	□□□□□ -1.59
BLM-209	ENST00000560559	RANBP2	P49792	3224 aa	Known RBP	5.08	□□□□□ -1.6
BLM-209	ENST00000560559	USP6	P35125	1406 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	CRB1	P82279	1406 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	CEP162	Q5TB80	1403 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	ANKRD30B	Q9BXX2	1392 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	GAGE12B	A1L429	117 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	GAGE12H	A6NDE8	117 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	TMEM200C	A6NKL6	621 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	LY86	O95711	162 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	CCDC172	P0C7W6	258 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	RAB27A	P51159	221 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	PIN1	Q13526	163 aa	Predicted RBP	5.08	□□□□□ -1.6
BLM-209	ENST00000560559	C21orf62-AS1	Q17RA5	79 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	LRCH2	Q5VUJ6	765 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	RNF219	Q5W0B1	726 aa	Predicted RBP	5.08	□□□□□ -1.6
BLM-209	ENST00000560559	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.08	□□□□□ -1.6
BLM-209	ENST00000560559	CCDC62	Q6P9F0	684 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	PASD1	Q8IV76	773 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	ARHGEF19	Q8IW93	802 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	TCEAL8	Q8IYN2	117 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	SVIP	Q8NHG7	77 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	TTC8	Q8TAM2	541 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	ITFG2	Q969R8	447 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	SLC39A13	Q96H72	371 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	SENP7	Q9BQF6	1050 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	LSM14B	Q9BX40	385 aa	Known RBP	5.08	□□□□□ -1.6
BLM-209	ENST00000560559	CDH19	Q9H159	772 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	ABT1	Q9ULW3	272 aa	Known RBP	5.08	□□□□□ -1.6
BLM-209	ENST00000560559	BTAF1	O14981	1849 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	CLTCL1	P53675	1640 aa		5.08	□□□□□ -1.6
BLM-209	ENST00000560559	COL5A2	P05997	1499 aa	Predicted RBP	5.07	□□□□□ -1.6
BLM-209	ENST00000560559	BRCA2	P51587	3418 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	TULP2	O00295	520 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	AKAP10	O43572	662 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	BRINP1	O60477	761 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	GAS7	O60861	476 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	HLA-DOA	P06340	250 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	CDK4	P11802	303 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	CAPN2	P17655	700 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	CLK3	P49761	638 aa	Known RBP	5.07	□□□□□ -1.6
BLM-209	ENST00000560559	RNASE9	P60153	205 aa	Known RBP	5.07	□□□□□ -1.6
BLM-209	ENST00000560559	GFOD2	Q3B7J2	385 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	LMBR1L	Q6UX01	489 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	ESPNL	Q6ZVH7	1005 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	ZBTB46	Q86UZ6	589 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	PLXDC1	Q8IUK5	500 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	UBR7	Q8N806	425 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	PPP1R14C	Q8TAE6	165 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	CAPNS2	Q96L46	248 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	GPR101	Q96P66	508 aa	Predicted RBP	5.07	□□□□□ -1.6
BLM-209	ENST00000560559	NCAPG	Q9BPX3	1015 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	USP36	Q9P275	1121 aa	Known RBP	5.07	□□□□□ -1.6
BLM-209	ENST00000560559	PNMA2	Q9UL42	364 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	INSL6	Q9Y581	213 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	COX11	Q9Y6N1	276 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	PKD1L2	Q7Z442	2459 aa		5.07	□□□□□ -1.6
BLM-209	ENST00000560559	RGPD8	O14715	1765 aa	Predicted RBP	5.06	□□□□□ -1.6
BLM-209	ENST00000560559	KNDC1	Q76NI1	1749 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	GPRASP1	Q5JY77	1395 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	LMO7	Q8WWI1	1683 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	ZBED9	Q6R2W3	1325 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559		A0A0G2JLW4	131 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	DIRC3	C9JPN6	131 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	LEFTY2	O00292	366 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	IPO8	O15397	1037 aa	Known RBP	5.06	□□□□□ -1.6
BLM-209	ENST00000560559	NRP2	O60462	931 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	KATNA1	O75449	491 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	SPATA31D3	P0C874	917 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	HKR1	P10072	659 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	NRG3	P56975	720 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	GUCY1B3	Q02153	619 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	NHLH2	Q02577	135 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	RAPGEF1	Q13905	1077 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	LRRC41	Q15345	812 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	FAM102B	Q5T8I3	360 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	FBXO42	Q6P3S6	717 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	CLEC4G	Q6UXB4	293 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	KSR2	Q6VAB6	950 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	SPATA31D4	Q6ZUB0	917 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	TAS1R1	Q7RTX1	841 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	LRRTM3	Q86VH5	581 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	MSL3	Q8N5Y2	521 aa	Known RBP	5.06	□□□□□ -1.6
BLM-209	ENST00000560559	CPEB3	Q8NE35	698 aa	Known RBP	5.06	□□□□□ -1.6
BLM-209	ENST00000560559	WDR66	Q8TBY9	1149 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	FAM210A	Q96ND0	272 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	TARS2	Q9BW92	718 aa	Known RBP	5.06	□□□□□ -1.6
BLM-209	ENST00000560559	PUS7L	Q9H0K6	701 aa	Known RBP	5.06	□□□□□ -1.6
BLM-209	ENST00000560559	ZMAT4	Q9H898	229 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
BLM-209	ENST00000560559	SLC5A4	Q9NY91	659 aa		5.06	□□□□□ -1.6
BLM-209	ENST00000560559	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.06	□□□□□ -1.6
BLM-209	ENST00000560559	POGK	Q9P215	609 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms