RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 TMEM196Q5HYL7 178 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 ERICH6BQ5W0A0 696 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 NECAB1Q8N987 351 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 KDF1Q8NAX2 398 aaPredicted RBP19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 HHIPQ96QV1 700 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 DDX19AQ9NUU7 478 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 ZMYM5Q9UJ78 669 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 STK24Q9Y6E0 443 aa19.38■□□□□ 0.69
TSPAN3-208ENST00000560514 MTMR11A4FU01 709 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 HIP1RO75146 1068 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 RNF40O75150 1001 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 TOM1L1O75674 476 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 SOAT2O75908 522 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 GBP1P32455 592 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 TUFMP49411 452 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 CYP4F8P98187 520 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 ORC2Q13416 577 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 RUNX3Q13761 415 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 SEZ6Q53EL9 994 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 FSTL4Q6MZW2 842 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 CC2D1AQ6P1N0 951 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 KIF12Q96FN5 646 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 ZBTB45Q96K62 511 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 SEPT5Q99719 369 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 ADAM33Q9BZ11 813 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 C17orf75Q9HAS0 396 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 PLEKHA5Q9HAU0 1116 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 LRWD1Q9UFC0 647 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 UBQLN1Q9UMX0 589 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 DNM3Q9UQ16 869 aa19.37■□□□□ 0.69
TSPAN3-208ENST00000560514 TRDMT1O14717 391 aaKnown RBP19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 SLC16A4O15374 487 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 CLDN3O15551 220 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 CXCL8P10145 99 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 LRPAP1P30533 357 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 AVPR1AP37288 418 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 SPAG1Q07617 926 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 BFSP1Q12934 665 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 ECM1Q16610 540 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 MGAT5BQ3V5L5 792 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 SH3PXD2AQ5TCZ1 1133 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 TAS1R3Q7RTX0 852 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 RAB34Q9BZG1 259 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 SMG9Q9H0W8 520 aaKnown RBP19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 DUSP15Q9H1R2 295 aaPredicted RBP19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 HSFX1Q9UBD0 423 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 KCNG1Q9UIX4 513 aa19.36■□□□□ 0.69
TSPAN3-208ENST00000560514 ABLIM1O14639 778 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 GIPC1O14908 333 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 KHNYNO15037 678 aaKnown RBP19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 APBB3O95704 486 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 ODC1P11926 461 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 TYMPP19971 482 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 DRD1P21728 446 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 PPP2R3AQ06190 1150 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 FBXO43Q4G163 708 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 SNX29Q8TEQ0 813 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 GTF3C6Q969F1 213 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 LPIN3Q9BQK8 851 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 EBF3Q9H4W6 596 aa19.35■□□□□ 0.69
TSPAN3-208ENST00000560514 NUP205Q92621 2012 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 MYH11P35749 1972 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 BCLAF3A2AJT9 711 aaKnown RBP19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 MEFVO15553 781 aaPredicted RBP19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 EGFP01133 1207 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 CEACAM1P13688 526 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 SPINK2P20155 84 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 CYP3A5P20815 502 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 AARSP49588 968 aaKnown RBP eCLIP19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 SMTNP53814 917 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 C11orf74Q86VG3 221 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 CMTM8Q8IZV2 173 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 TTC9BQ8N6N2 239 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 NSUN7Q8NE18 718 aaKnown RBP19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 FAM83CQ9BQN1 747 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 SLC46A2Q9BY10 475 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 TMEM9BQ9NQ34 198 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 ASPMQ8IZT6 3477 aa19.34■□□□□ 0.69
TSPAN3-208ENST00000560514 LAMA1P25391 3075 aa19.33■□□□□ 0.69
TSPAN3-208ENST00000560514 LNP1A1A4G5 178 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 DCLK1O15075 740 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 EIF5BO60841 1220 aaKnown RBP19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 LARGE1O95461 756 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 CLTAP09496 248 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 HOXB3P14651 431 aaPredicted RBP19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 FXR2P51116 673 aaKnown RBP eCLIP19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 GUCY1B3Q02153 619 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 PSMD2Q13200 908 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 TTC38Q5R3I4 469 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 TRIM68Q6AZZ1 485 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 ZPBP2Q6X784 338 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 DAW1Q8N136 415 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 RPLP0P6Q8NHW5 317 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 ACDQ96AP0 544 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 BICD1Q96G01 975 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 P2RY13Q9BPV8 354 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 HPS4Q9NQG7 708 aa19.33■□□□□ 0.68
TSPAN3-208ENST00000560514 SFI1A8K8P3 1242 aa19.32■□□□□ 0.68
TSPAN3-208ENST00000560514 E9PMD0 336 aa19.32■□□□□ 0.68
TSPAN3-208ENST00000560514 JAK2O60674 1132 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms