RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 DEF6Q9H4E7 631 aa7.74□□□□□ -1.17
HMBOX1-214ENST00000560357 FAM124BQ9H5Z6 455 aaPredicted RBP7.74□□□□□ -1.17
HMBOX1-214ENST00000560357 TRMT1Q9NXH9 659 aaKnown RBP7.74□□□□□ -1.17
HMBOX1-214ENST00000560357 GDAP2Q9NXN4 497 aa7.74□□□□□ -1.17
HMBOX1-214ENST00000560357 KANSL3Q9P2N6 904 aa7.74□□□□□ -1.17
HMBOX1-214ENST00000560357 ADAMTS1Q9UHI8 967 aa7.74□□□□□ -1.17
HMBOX1-214ENST00000560357 NENFQ9UMX5 172 aa7.74□□□□□ -1.17
HMBOX1-214ENST00000560357 SNX9Q9Y5X1 595 aa7.74□□□□□ -1.17
HMBOX1-214ENST00000560357 LTBP2Q14767 1821 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 FNDC1Q4ZHG4 1894 aaPredicted RBP7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 A0A0U1RQJ8 604 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 CASTOR2A6NHX0 329 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 PODXLO00592 558 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 ZSCAN12O43309 604 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 HOXA2O43364 376 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 B4GALT3O60512 393 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 CILPO75339 1184 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 TACC1O75410 805 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 CALCAP01258 141 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 PFKMP08237 780 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 FAM163BP0C2L3 166 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 GATMP50440 423 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 PDE6CP51160 858 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 CLCNKBP51801 687 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 RAD23BP54727 409 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 KRT83P78385 493 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 FMO1Q01740 532 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 CDR2Q01850 454 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 INCA1Q0VD86 236 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 BMS1Q14692 1282 aaKnown RBP7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 SPA17Q15506 151 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 SOWAHAQ2M3V2 549 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 CD300LGQ6UXG3 332 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 DPH6Q7L8W6 267 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 VPS36Q86VN1 386 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 ZNF280BQ86YH2 543 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 GLYCTKQ8IVS8 523 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 RPUSD2Q8IZ73 545 aaKnown RBP7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 TTC39CQ8N584 583 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 C3orf58Q8NDZ4 430 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 ATRIPQ8WXE1 791 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 RABGGTAQ92696 567 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 PPP1R13BQ96KQ4 1090 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 SENP8Q96LD8 212 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 UROC1Q96N76 676 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 MMS19Q96T76 1030 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 MRPL45Q9BRJ2 306 aaKnown RBP7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 ELOVL4Q9GZR5 314 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 IL23AQ9NPF7 189 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 TBC1D13Q9NVG8 400 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 NAGPAQ9UK23 515 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 LRFN2Q9ULH4 789 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 BARX2Q9UMQ3 279 aaPredicted RBP7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 PCDHA13Q9Y5I0 950 aa7.73□□□□□ -1.17
HMBOX1-214ENST00000560357 RCCD1A6NED2 376 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 CYB561D2O14569 222 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 CCP110O43303 1012 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 EFCAB14O75071 495 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 B3GAT3O94766 335 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 IPO7O95373 1038 aaKnown RBP7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 MMEP08473 750 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 PAEPP09466 180 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ACRP10323 421 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 PAX3P23760 479 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 GNA15P30679 374 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ARHGAP25P42331 645 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 MAGEA1P43355 309 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 AARSP49588 968 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 VAV2P52735 878 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 NDST1P52848 882 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ZNF394Q53GI3 561 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 CCDC122Q5T0U0 273 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 C10orf76Q5T2E6 689 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 TAF3Q5VWG9 929 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ALKBH5Q6P6C2 394 aaKnown RBP7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 DCLRE1AQ6PJP8 1040 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ZNF662Q6ZS27 426 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 C16orf59Q7L2K0 433 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ZNF677Q86XU0 584 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 PALB2Q86YC2 1186 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 COLGALT2Q8IYK4 626 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ABI1Q8IZP0 508 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 TOP6BLQ8N6T0 577 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 SLC4A11Q8NBS3 891 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 APPL2Q8NEU8 664 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 KBTBD7Q8WVZ9 684 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ZNF606Q8WXB4 792 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 RSPH1Q8WYR4 309 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 TFAP2BQ92481 460 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 BADQ92934 168 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 TOP1MTQ969P6 601 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 TMEM176AQ96HP8 235 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 TWNKQ96RR1 684 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 PCDHB18PQ96TA0 734 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 ZSWIM1Q9BR11 485 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 NRDE2Q9H7Z3 1164 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 HMGXB4Q9UGU5 601 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 L1RE1Q9UN81 338 aa7.72□□□□□ -1.17
HMBOX1-214ENST00000560357 TFR2Q9UP52 801 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms