RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 KPNB1Q14974 876 aaKnown RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 SETDB1Q15047 1291 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 TRADDQ15628 312 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 EDRF1Q3B7T1 1238 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ELOA3BQ3SY89 546 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNF568Q3ZCX4 644 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 SH2D4BQ5SQS7 431 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 OR52E8Q6IFG1 317 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ZDHHC24Q6UX98 284 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 C6orf15Q6UXA7 325 aaPredicted RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ADAMTSL4Q6UY14 1074 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ARHGEF18Q6ZSZ5 1173 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 CEP128Q6ZU80 1094 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 H2AFVQ71UI9 128 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 DDX42Q86XP3 938 aaKnown RBP eCLIP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 NELFCDQ8IXH7 590 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 SPICE1Q8N0Z3 855 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 THEMISQ8N1K5 641 aaPredicted RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 LCORLQ8N3X6 602 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 STKLD1Q8NE28 680 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ELOA3Q8NG57 546 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNF417Q8TAU3 575 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 MDM1Q8TC05 714 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 DYDC1Q8WWB3 177 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 MAIP1Q8WWC4 291 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNF333Q96JL9 665 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNF587Q96SQ5 575 aaPredicted RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 LZTS2Q9BRK4 669 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 MXD3Q9BW11 206 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 RAB34Q9BZG1 259 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 MIS12Q9H081 205 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 METTL14Q9HCE5 456 aaKnown RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 PCDH12Q9NPG4 1184 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 SAR1AQ9NR31 198 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 CNNM1Q9NRU3 951 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ATXN10Q9UBB4 475 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 PCYOX1Q9UHG3 505 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 AMACRQ9UHK6 382 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 LGALS13Q9UHV8 139 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 NAGPAQ9UK23 515 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 SLC6A14Q9UN76 642 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 ATP8A1Q9Y2Q0 1164 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 POLR3KQ9Y2Y1 108 aaPredicted RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 STARD13Q9Y3M8 1113 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 C2CD2Q9Y426 696 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 USH1CQ9Y6N9 552 aa6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.35□□□□□ -1.39
SNRPA1-209ENST00000560307 NUP98P52948 1817 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PFASO15067 1338 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM205AQ6ZU69 1335 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PCDH11YQ9BZA8 1340 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 ESYT2A0FGR8 921 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 GTPBP10A4D1E9 387 aaKnown RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM86C2PA6NEL3 165 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 hCG_1984214I3L0E3 225 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 KIAA0391O15091 583 aaKnown RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 MAPK13O15264 365 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 DDX3YO15523 660 aaKnown RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PDE8AO60658 829 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 GSTP1P09211 210 aaKnown RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 TMEM253P0C7T8 217 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 FCER1AP12319 257 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 KCNA6P17658 529 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 SMARCA1P28370 1054 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 POLR2FP61218 127 aaKnown RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 RPL26P61254 145 aaKnown RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 CAV1Q03135 178 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PPATQ06203 517 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 RAPGEF1Q13905 1077 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 GRM4Q14833 912 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 CYP1B1Q16678 543 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 MUM1Q2TAK8 710 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 SBK1Q52WX2 424 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNF468Q5VIY5 522 aaPredicted RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 TMEM154Q6P9G4 183 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 KIF6Q6ZMV9 814 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 SYDE1Q6ZW31 735 aaPredicted RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 DAAM2Q86T65 1068 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 JAMLQ86YT9 394 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 MYOCDQ8IZQ8 938 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 FITM2Q8N6M3 262 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNF713Q8N859 430 aaPredicted RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 RFFLQ8WZ73 363 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PRCCQ92733 491 aaPredicted RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PTPRN2Q92932 1015 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 SLCO2A1Q92959 643 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 OPTNQ96CV9 577 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 BORCS6Q96GS4 357 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 FGD4Q96M96 766 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 OLFM3Q96PB7 478 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 SYT15Q9BQS2 421 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM167BQ9BTA0 163 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 TMEM60Q9H2L4 133 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 UBN1Q9NPG3 1134 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 GRHL1Q9NZI5 618 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 SEC63Q9UGP8 760 aaKnown RBP6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PCDHA6Q9UN73 950 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 SSX2IPQ9Y2D8 614 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PRKAB1Q9Y478 270 aa6.34□□□□□ -1.39
SNRPA1-209ENST00000560307 PCDHA8Q9Y5H6 950 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms