RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 RBM25P49756 843 aaKnown RBP6.38□□□□□ -1.39
USP3-215ENST00000559771 TOB1P50616 345 aaPredicted RBP6.38□□□□□ -1.39
USP3-215ENST00000559771 NEK4P51957 841 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 GP2P55259 537 aaKnown RBP6.38□□□□□ -1.39
USP3-215ENST00000559771 NCBP1Q09161 790 aaKnown RBP6.38□□□□□ -1.39
USP3-215ENST00000559771 MAPK7Q13164 816 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 PRPF4BQ13523 1007 aaKnown RBP6.38□□□□□ -1.39
USP3-215ENST00000559771 NR6A1Q15406 480 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 ZNF174Q15697 407 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 IL17AQ16552 155 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 UPP1Q16831 310 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 SLC5A9Q2M3M2 681 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 GLRA4Q5JXX5 417 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 SPECC1Q5M775 1068 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
USP3-215ENST00000559771 DCLRE1AQ6PJP8 1040 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 SHISA2Q6UWI4 295 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 ALKAL1Q6UXT8 129 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 CEP57Q86XR8 500 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 HACE1Q8IYU2 909 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 PJA1Q8NG27 643 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 ZMAT2Q96NC0 199 aaKnown RBP6.38□□□□□ -1.39
USP3-215ENST00000559771 KIF2CQ99661 725 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 MMTAG2Q9BU76 263 aaKnown RBP6.38□□□□□ -1.39
USP3-215ENST00000559771 PLA2G2FQ9BZM2 168 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 C2orf40Q9H1Z8 148 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 PIDD1Q9HB75 910 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 BRMS1Q9HCU9 246 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 MTRRQ9UBK8 725 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 CDH7Q9ULB5 785 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 GDAQ9Y2T3 454 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 SIT1Q9Y3P8 196 aa6.38□□□□□ -1.39
USP3-215ENST00000559771 CACNA1IQ9P0X4 2223 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 SMIM28A0A1B0GU29 152 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 PP2D1A8MPX8 630 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 M0R082 166 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 ABLIM3O94929 683 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 OR52Z1P0C646 297 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 MAPTP10636 758 aaKnown RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 LIG1P18858 919 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 PROZP22891 400 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 FCARP24071 287 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 CREMQ03060 361 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 SNW1Q13573 536 aaKnown RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 MRPL58Q14197 206 aaKnown RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 MAPK6Q16659 721 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 C8orf34Q49A92 452 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 PPM1LQ5SGD2 360 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 ATF7IP2Q5U623 682 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 ELMSAN1Q6PJG2 1045 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 KCNK18Q7Z418 384 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 C1orf210Q8IVY1 113 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 ZBTB8OSQ8IWT0 167 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 IGSF22Q8N9C0 903 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 SUMF1Q8NBK3 374 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 FBXO18Q8NFZ0 1043 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 ZNF417Q8TAU3 575 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 SLC7A14Q8TBB6 771 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 RMDN1Q96DB5 314 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 CCDC43Q96MW1 224 aaKnown RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 ZNF587Q96SQ5 575 aaPredicted RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 ACO2Q99798 780 aaKnown RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 KXD1Q9BQD3 176 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 CDT1Q9H211 546 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 BHMT2Q9H2M3 363 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 FOXP1Q9H334 677 aaPredicted RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 ARHGAP28Q9P2N2 729 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 TNFSF13BQ9Y275 285 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 BACE2Q9Y5Z0 518 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 CDY1Q9Y6F8 540 aa6.37□□□□□ -1.39
USP3-215ENST00000559771 ZFP37Q9Y6Q3 630 aaPredicted RBP6.37□□□□□ -1.39
USP3-215ENST00000559771 PTPRZ1P23471 2315 aaPredicted RBP6.36□□□□□ -1.39
USP3-215ENST00000559771 OTOGLQ3ZCN5 2332 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 NCANO14594 1321 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 KANSL1LA0AUZ9 987 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 ARHGEF37A1IGU5 675 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 WDR27A2RRH5 827 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 ARHGEF35A5YM69 484 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 E9PMD0 336 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 MOSPD3O75425 235 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 B3GAT3O94766 335 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 SEC24AO95486 1093 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 VNN2O95498 520 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 LMNAP02545 664 aaKnown RBP6.36□□□□□ -1.39
USP3-215ENST00000559771 CEBPBP17676 345 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 CD72P21854 359 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 MUTP22033 750 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 CDC25AP30304 524 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 CCR2P41597 374 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 ID4P47928 161 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 NPTX2P47972 431 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 ROR1Q01973 937 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 ELAVL2Q12926 359 aaKnown RBP6.36□□□□□ -1.39
USP3-215ENST00000559771 ORC2Q13416 577 aaPredicted RBP6.36□□□□□ -1.39
USP3-215ENST00000559771 UVSSAQ2YD98 709 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 DCAF4L1Q3SXM0 396 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 SLC44A4Q53GD3 710 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 TTC38Q5R3I4 469 aa6.36□□□□□ -1.39
USP3-215ENST00000559771 LIN9Q5TKA1 542 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms