RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 PSMD2Q13200 908 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 PLD1Q13393 1074 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 HTR4Q13639 388 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 SLC39A12Q504Y0 691 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 WSCD1Q658N2 575 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 NPAS3Q8IXF0 933 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 LRRC52Q8N7C0 313 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 XXYLT1Q8NBI6 393 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 ST13P5Q8NFI4 369 aaPredicted RBP13.56□□□□□ -0.24
LRRC28-214ENST00000559433 OR5B17Q8NGF7 314 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 CCDC47Q96A33 483 aaKnown RBP13.56□□□□□ -0.24
LRRC28-214ENST00000559433 BORCS6Q96GS4 357 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 IRF2BPLQ9H1B7 796 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 AVENQ9NQS1 362 aaPredicted RBP13.56□□□□□ -0.24
LRRC28-214ENST00000559433 INTS13Q9NVM9 706 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
LRRC28-214ENST00000559433 SIX4Q9UIU6 781 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 NUMBLQ9Y6R0 609 aa13.56□□□□□ -0.24
LRRC28-214ENST00000559433 MTMR11A4FU01 709 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 HUS1O60921 280 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 PDGFBP01127 241 aaPredicted RBP13.55□□□□□ -0.24
LRRC28-214ENST00000559433 CFHP08603 1231 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 DLATP10515 647 aaKnown RBP13.55□□□□□ -0.24
LRRC28-214ENST00000559433 CEBPBP17676 345 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 ALDH1A3P47895 512 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 PTPN5P54829 565 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 CYP24A1Q07973 514 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 DUSP4Q13115 394 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 DUOXA2Q1HG44 320 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 SCARA3Q6AZY7 606 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
LRRC28-214ENST00000559433 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 PDZD4Q76G19 769 aaPredicted RBP13.55□□□□□ -0.24
LRRC28-214ENST00000559433 WDR49Q8IV35 697 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 C12orf56Q8IXR9 622 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 SIX5Q8N196 739 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 GOLGA5Q8TBA6 731 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 CCDC127Q96BQ5 260 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 FNBP1Q96RU3 617 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 RTP3Q9BQQ7 232 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 ZCWPW1Q9H0M4 648 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 ASAH2Q9NR71 780 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 CEP72Q9P209 647 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
LRRC28-214ENST00000559433 GOLGA6L4A6NEF3 574 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 EXOC3O60645 756 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 PRPF40AO75400 957 aaKnown RBP13.54□□□□□ -0.24
LRRC28-214ENST00000559433 SRFP11831 508 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 TNNI1P19237 187 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 CLCN5P51795 746 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 CDR1P51861 262 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 NUBP1P53384 320 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 EPHB3P54753 998 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 MYO1EQ12965 1108 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 PSMD6Q15008 389 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 PRSS36Q5K4E3 855 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 IER5LQ5T953 404 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 PARM1Q6UWI2 310 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 HS6ST3Q8IZP7 471 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 PDCL2Q8N4E4 241 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 TTC9BQ8N6N2 239 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 FGF14Q92915 247 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 MCRS1Q96EZ8 462 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 SEPT5Q99719 369 aaPredicted RBP13.54□□□□□ -0.24
LRRC28-214ENST00000559433 GDE1Q9NZC3 331 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 WNT16Q9UBV4 365 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 L1RE1Q9UN81 338 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 SNX9Q9Y5X1 595 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 MUC6Q6W4X9 2439 aa13.54□□□□□ -0.24
LRRC28-214ENST00000559433 SOAT2O75908 522 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 ZNF202O95125 648 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 MYL4P12829 197 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 CCR2P41597 374 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 VCPP55072 806 aaKnown RBP13.53□□□□□ -0.24
LRRC28-214ENST00000559433 TSPY1Q01534 308 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 DPYDQ12882 1025 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 TAF12Q16514 161 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 DCP1BQ8IZD4 617 aaKnown RBP13.53□□□□□ -0.24
LRRC28-214ENST00000559433 TMEM86AQ8N2M4 240 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 LEMD2Q8NC56 503 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 C2orf15Q8WU43 125 aaKnown RBP13.53□□□□□ -0.24
LRRC28-214ENST00000559433 TCEAL4Q96EI5 215 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 CCDC34Q96HJ3 373 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 KXD1Q9BQD3 176 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 GDAP2Q9NXN4 497 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 DDX43Q9NXZ2 648 aaKnown RBP13.53□□□□□ -0.24
LRRC28-214ENST00000559433 HSFX1Q9UBD0 423 aa13.53□□□□□ -0.24
LRRC28-214ENST00000559433 WDFY4Q6ZS81 3184 aa13.52□□□□□ -0.24
LRRC28-214ENST00000559433 RHOBTB3O94955 611 aa13.52□□□□□ -0.25
LRRC28-214ENST00000559433 KIF20AO95235 890 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms